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AT5G16970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:22318864 (2012): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : alkenal reductase
Curator
Summary (TAIR10)
encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls
Computational
Description (TAIR10)
alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G16970-MONOMERBioCyc:MetaCyc:AT5G16970-MONOMERBioGrid:16836DNASU:831560
EC:1.3.1.74eggNOG:COG2130eggNOG:KOG1196EMBL:AL391141
EMBL:CP002688EMBL:Z49768EnsemblPlants:AT5G16970EnsemblPlants:AT5G16970.1
entrez:831560EvolutionaryTrace:Q39172ExpressionAtlas:Q39172Gene3D:3.40.50.720
Gene3D:3.90.180.10GeneID:831560Genevisible:Q39172GO:GO:0005634
GO:GO:0005829GO:GO:0006979GO:GO:0008270GO:GO:0032440
GO:GO:0046686Gramene:AT5G16970.1hmmpanther:PTHR11695hmmpanther:PTHR11695:SF504
HOGENOM:HOG000294663InParanoid:Q39172IntAct:Q39172InterPro:IPR002085
InterPro:IPR011032InterPro:IPR013149InterPro:IPR016040InterPro:IPR020843
KEGG:ath:AT5G16970KO:K08070OMA:KCRETITPANTHER:PTHR11695
PaxDb:Q39172PDB:2J3HPDB:2J3IPDB:2J3J
PDB:2J3KPDBsum:2J3HPDBsum:2J3IPDBsum:2J3J
PDBsum:2J3KPfam:PF00107Pfam:PF16884Pfam:Q39172
PhylomeDB:Q39172PIR:S57611PRIDE:Q39172PRO:PR:Q39172
ProteinModelPortal:Q39172Proteomes:UP000006548RefSeq:NP_197199.1SMART:SM00829
SMR:Q39172STRING:3702.AT5G16970.1SUPFAM:SSF50129SUPFAM:SSF51735
TAIR:AT5G16970tair10-symbols:AERtair10-symbols:AT-AERUniGene:At.22432
UniProt:Q39172UniProt:Q501A9
Coordinates (TAIR10) chr5:-:5576291..5578001
Molecular Weight (calculated) 38135.90 Da
IEP (calculated) 6.10
GRAVY (calculated) -0.10
Length 345 amino acids
Sequence (TAIR10)
(BLAST)
001: MTATNKQVIL KDYVSGFPTE SDFDFTTTTV ELRVPEGTNS VLVKNLYLSC DPYMRIRMGK PDPSTAALAQ AYTPGQPIQG YGVSRIIESG HPDYKKGDLL
101: WGIVAWEEYS VITPMTHAHF KIQHTDVPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQLAKMMG CYVVGSAGSK EKVDLLKTKF
201: GFDDAFNYKE ESDLTAALKR CFPNGIDIYF ENVGGKMLDA VLVNMNMHGR IAVCGMISQY NLENQEGVHN LSNIIYKRIR IQGFVVSDFY DKYSKFLEFV
301: LPHIREGKIT YVEDVADGLE KAPEALVGLF HGKNVGKQVV VVARE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)