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AT1G76690.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
peroxisome 0.667
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 12-oxophytodienoate reductase 2
Curator
Summary (TAIR10)
Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein.
Computational
Description (TAIR10)
12-oxophytodienoate reductase 2 (OPR2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 1 (TAIR:AT1G76680.1); Has 13197 Blast hits to 13176 proteins in 2056 species: Archae - 127; Bacteria - 9811; Metazoa - 29; Fungi - 865; Plants - 452; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G76690-MONOMERBRENDA:1.3.1.42EC:1.3.1.42eggNOG:COG1902
eggNOG:KOG0134EMBL:AC010718EMBL:AK117738EMBL:BT025251
EMBL:CP002684EMBL:U92460EnsemblPlants:AT1G76690EnsemblPlants:AT1G76690.1
entrez:844002Gene3D:3.20.20.70GeneID:844002Genevisible:Q8GYB8
GO:GO:0003959GO:GO:0005622GO:GO:0005737GO:GO:0009611
GO:GO:0010181GO:GO:0016629GO:GO:0031408GO:GO:0055114
Gramene:AT1G76690.1hmmpanther:PTHR22893hmmpanther:PTHR22893:SF44HOGENOM:HOG000116231
InParanoid:Q8GYB8InterPro:IPR001155InterPro:IPR013785KEGG:ath:AT1G76690
KO:K05894OMA:NTFQPNGPaxDb:Q8GYB8Pfam:PF00724
Pfam:Q8GYB8PhylomeDB:Q8GYB8PIR:C96795PRIDE:Q8GYB8
PRO:PR:Q8GYB8ProteinModelPortal:Q8GYB8Proteomes:UP000006548RefSeq:NP_177795.1
SMR:Q8GYB8STRING:3702.AT1G76690.1SUPFAM:SSF51395TAIR:AT1G76690
tair10-symbols:ATOPR2tair10-symbols:OPR2UniGene:At.48382UniGene:At.70992
UniPathway:UPA00382UniProt:Q8GYB8
Coordinates (TAIR10) chr1:+:28778976..28780355
Molecular Weight (calculated) 41569.70 Da
IEP (calculated) 7.59
GRAVY (calculated) -0.34
Length 374 amino acids
Sequence (TAIR10)
(BLAST)
001: MEMVNAEAKQ SVPLLTPYKM GRFNLSHRVV LAPLTRQKSY GSVPQPHAIL YYSQRTSPGG FLIAEATGVS DTAQGYPDTP GIWTKEHVEA WKPIVDAVHA
101: KGGIFFCQIW HVGRVSNRGF QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD GVEIHGAHGY LIDQFMKDKV
201: NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG
301: TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP VVGYTDYPSL ESTA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)