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AT3G59780.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Rhodanese/Cell cycle control phosphatase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: calcium sensing receptor (TAIR:AT5G23060.1); Has 1153 Blast hits to 413 proteins in 144 species: Archae - 0; Bacteria - 338; Metazoa - 73; Fungi - 101; Plants - 75; Viruses - 6; Other Eukaryotes - 560 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IK9BeggNOG:ENOG4111046EMBL:CP002686EnsemblPlants:AT3G59780
EnsemblPlants:AT3G59780.1entrez:825147Gene3D:3.40.250.10GeneID:825147
Gramene:AT3G59780.1hmmpanther:PTHR34209hmmpanther:PTHR34209:SF1InParanoid:F4J9G2
InterPro:IPR001763KEGG:ath:AT3G59780OMA:FQSWVKQPaxDb:F4J9G2
Pfam:PF00581Pfscan:PS50206PRIDE:F4J9G2PROSITE:PS50206
ProteinModelPortal:F4J9G2Proteomes:UP000006548RefSeq:NP_191537.4SMART:SM00450
STRING:3702.AT3G59780.1SUPFAM:SSF52821TAIR:AT3G59780UniGene:At.43704
UniProt:F4J9G2
Coordinates (TAIR10) chr3:+:22086906..22090324
Molecular Weight (calculated) 73938.80 Da
IEP (calculated) 4.58
GRAVY (calculated) -0.14
Length 686 amino acids
Sequence (TAIR10)
(BLAST)
001: MFPLCSATSC RYHSQILFPG NWRGCSSFRR ELIHRYSSGD NAFFGISNGT RLQKSFVPQA TGSFLTGTIE KTEQPVSTFG SLCQNELDRI NYMVYNMSEA
101: FVASDEGLTY VENGEDVFPV EAVAADVSPV EAVVPDVSPI ECLSAETLTD KTSSLIDSVE SGTNATVKIS PDSSVSLPDA KASFDDFSSG LKQSFSSSLP
201: DAKASVDDFS SGVKESFSSS LNQGENAVKN TLESFSSSVT SITKNASEVV DSAVNRAFST LDQTGDVAGD KFSSFSTGLK EASNRAAVIA IDLLRQSVSL
301: GERSVTNGVS FVVYSYGSAK ELLPPDVKSA LNSSEDVALK VLSPVGAVLQ QVSVAIGGLE RNIGLDPDDP ILHLFLFVGT TGTFWVLYRV WTYGGYAGDL
401: SPKSTLDLLK SRDKSVLIDV RPEALREKDG IPDLRRSARF RYSSVTLPEV DGDVKRLLKG GSEVDDILTA VIIKNLKIVQ DRSKVVVMDA DGTRSKGIAR
501: ALRKVGIKRP YLMQGGYRSW VQEGLRVKEP KPETTLTILN EEAEAIFEDI NPSPLQLFGV GVGFFAALYA LSEWEKTLQL IAVIGLSLTI YLRLSSYDDS
601: EDFKQDVRLL LAPVKLGAQA FSWAAGKLET NGVGLPTSPS SSDVRSRVLQ AAAKHESKPS DETSESLQDA SSSPEEALNN VDVSEA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)