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AT2G16850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31023727 (2019): mitochondrion
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:23990937 (2013): plasma membrane
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21413151 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:14517339 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : plasma membrane intrinsic protein 2;8
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink).
Protein Annotations
BioGrid:1543eggNOG:COG0580eggNOG:KOG0223EMBL:AC005167
EMBL:AC005825EMBL:AK228097EMBL:BT005214EMBL:CP002685
EnsemblPlants:AT2G16850EnsemblPlants:AT2G16850.1entrez:816186Gene3D:1.20.1080.10
GeneID:816186Genevisible:Q9ZVX8GO:GO:0005773GO:GO:0005886
GO:GO:0006833GO:GO:0009506GO:GO:0009737GO:GO:0015250
GO:GO:0015254GO:GO:0015793GO:GO:0016020GO:GO:0016021
GO:GO:0034220Gramene:AT2G16850.1hmmpanther:PTHR19139hmmpanther:PTHR19139:SF152
HOGENOM:HOG000288286InParanoid:Q9ZVX8IntAct:Q9ZVX8InterPro:IPR000425
InterPro:IPR022357InterPro:IPR023271iPTMnet:Q9ZVX8KEGG:ath:AT2G16850
KO:K09872OMA:PRAVAYMPANTHER:PTHR19139PaxDb:Q9ZVX8
Pfam:PF00230Pfam:Q9ZVX8PhylomeDB:Q9ZVX8PIR:A84545
PRIDE:Q9ZVX8PRINTS:PR00783PRO:PR:Q9ZVX8PROSITE:PS00221
ProteinModelPortal:Q9ZVX8Proteomes:UP000006548Reactome:R-ATH-432047RefSeq:NP_179277.1
scanprosite:PS00221SMR:Q9ZVX8STRING:3702.AT2G16850.1SUPFAM:SSF81338
TAIR:AT2G16850tair10-symbols:PIP2;8tair10-symbols:PIP3BTCDB:1.A.8.11.6
TIGRfam:TIGR00861TIGRFAMs:TIGR00861TMHMM:TMhelixUniGene:At.27545
UniProt:Q9ZVX8
Coordinates (TAIR10) chr2:+:7301647..7303180
Molecular Weight (calculated) 29502.10 Da
IEP (calculated) 9.07
GRAVY (calculated) 0.52
Length 278 amino acids
Sequence (TAIR10)
(BLAST)
001: MSKEVSEEGR HGKDYVDPPP APLLDMAELK LWSFYRAIIA EFIATLLFLY VTVATVIGHK NQTGPCGGVG LLGIAWAFGG MIFVLVYCTA GISGGHINPA
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)