AT2G29250.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Concanavalin A-like lectin protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT2G29220.1); Has 66608 Blast hits to 65883 proteins in 2250 species: Archae - 48; Bacteria - 5097; Metazoa - 22172; Fungi - 3705; Plants - 27679; Viruses - 157; Other Eukaryotes - 7750 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:12578909..12580780 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 68220.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.27 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 623 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MANTYKSIAV SIIFLLYFSC VSSQQQTKFL NHGFLEANLL KSGSSKIHPS GHLELTNTSM RQIGQAFHGF PIPFLNPNSS NLVSFPTSFV FAITPGPGAP 101: GHGLAFVISP SLDFSGALPS NYLGLFNTSN NGNSLNCILA VEFDTVQAVE LNDIDDNHVG IDLNGVISIE STSAEYFDDR EAKNISLRLA SGKPIRVWIE 201: YNATETMLNV TLAPLDRPKP KLPLLSRKLN LSGIISEENY VGFSAATGTV TSSHFVLGWS FSIEGKASDF DITKLPSLPD PLPPLSPSPS PPVSVMKNSS 301: NTMLIIIIAA SAIFGILILS FLAVCFFRRT ENFTGGARKF SHQTISSATG GFDNSKLLGE GNSGSFYKGQ LAPTEIIAVK RITCNTRQEK TALIAEIDAI 401: SKVKQRNLVD LHGYCSKGNE IYLVYEYVIN RSLDRFLFSN DLPVLKWVHR FCIIKGIASA LQHLHAEVQK PLIHGNVKAS NVLLDGELNA RLGDYGHGSR 501: HSTTGHVAPE LVNTGKATCA TDVFEFGVLI MEIVCGRRAI EPTKEPVEIS LVNWVLRGVK SGNLLRRCDK RIKKKNLVSE EVLLVLKTGL LCVRRSPEDR 601: PMMKKVLEYL NGTEHLPHDD YVV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)