AT1G22750.1::SUBA5

AT1G22750.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
vacuole 0.638
What is SUBAcon?

Predictors

External Curations

AmiGO : vacuole 15539469
TAIR : vacuole 15539469

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:24134884 (2013): cytoskeleton microtubules	PMID:24833385 (2014): AT3G10640.1:None: PMID:24833385 (2014): AT2G22425.1:None: PMID:24833385 (2014): AT1G21240.1:None: PMID:24833385 (2014): AT5G59650.1:None: PMID:24833385 (2014): AT5G63030.1:None: PMID:24833385 (2014): AT3G12180.1:None: PMID:21798944 (2011): AT5G22290.1:None: PMID:21798944 (2011): AT3G60600.1:Y2H: PMID:21798944 (2011): AT4G35580.1:Y2H: PMID:21798944 (2011): AT4G19030.1:Y2H:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
AT1G73650.1 plasma membrane [12.15] AT5G15910.1 mitochondrion [6.96] AT4G04850.1 plastid [6.84] AT4G34720.1 vacuole [6.34] AT3G61220.1 cytosol [6.29] AT5G59770.1 endoplasmic reticulum, plasma membrane [5.75] AT4G37760.1 plastid, vacuole [5.73] AT3G57020.1 endoplasmic reticulum [5.65] AT4G36530.1 plastid [5.65] AT1G07700.1 plastid [5.52]	AT5G63030.1 cytosol AT2G22425.1 endoplasmic reticulum AT3G12180.1 endoplasmic reticulum AT3G10640.1 nucleus AT4G35580.1 nucleus AT5G22290.1 nucleus AT1G21240.1 plasma membrane AT4G19030.1 plasma membrane AT5G59650.1 plasma membrane AT3G60600.1 endoplasmic reticulum, plasma membrane

Description (TAIR10)

protein_coding :

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 185 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410IH27	eggNOG:ENOG410YDCZ	EMBL:AY050850	EMBL:AY096749
EMBL:CP002684	EnsemblPlants:AT1G22750	EnsemblPlants:AT1G22750.1	entrez:838881
ExpressionAtlas:Q949W5	GeneID:838881	GO:GO:0016021	Gramene:AT1G22750.1
hmmpanther:PTHR36318	hmmpanther:PTHR36318:SF2	HOGENOM:HOG000071019	IntAct:Q949W5
InterPro:IPR009943	Pfam:PF07343	PhylomeDB:Q949W5	Proteomes:UP000006548
RefSeq:NP_564179.1	STRING:3702.AT1G22750.4	TAIR:AT1G22750	TMHMM:TMhelix
UniGene:At.24405	UniProt:Q949W5

Coordinates (TAIR10)

chr1:+:8050911..8052618

Molecular Weight (calculated)

27328.30 Da

IEP (calculated)

5.12

GRAVY (calculated)

0.93

Length

244 amino acids

Sequence (TAIR10)
(BLAST)

001: MATTSLVTGL KVVLPVMFCL MLATLVYTII TDGLPLPDRQ DVFTPWFVTT ILDFYINLVP IAVWIVYKES TWSGSILWTI LLIIFGSLTT CVYLFLQLLK
101: LTNQEASEDP MYYLLLRDSI KDGVGLRDKN SLVVTARFVF GALGCVMLGA LVYTCFTYGS PFHMELLYPW MVVLLVNFYI DVAVLSVWVV YKESSLIIGI
201: LWVALLIGLG SVGTSAVIVV QLFRLSPLDP LYLVLVNNSN RKQS