AT3G61220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, (-)-menthol dehydrogenase activity, (+)-neomenthol dehydrogenase activity; INVOLVED IN: response to karrikin, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.1); Has 78247 Blast hits to 78183 proteins in 3234 species: Archae - 733; Bacteria - 53633; Metazoa - 4843; Fungi - 3816; Plants - 2340; Viruses - 0; Other Eukaryotes - 12882 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22663025..22664316 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32805.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.14 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 296 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAEETPRYAV VTGANRGIGF EICRQLASEG IRVVLTSRDE NRGLEAVETL KKELEISDQS LLFHQLDVAD PASITSLAEF VKTQFGKLDI LVNNAGIGGI 101: ITDAEALRAG AGKEGFKWDE IITETYELTE ECIKINYYGP KRMCEAFIPL LKLSDSPRIV NVSSSMGQLK NVLNEWAKGI LSDAENLTEE RIDQVINQLL 201: NDFKEGTVKE KNWAKFMSAY VVSKASLNGY TRVLAKKHPE FRVNAVCPGF VKTDMNFKTG VLSVEEGASS PVRLALLPHQ ETPSGCFFSR KQVSEF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)