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AT1G07370.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22550958 (2012): plastid
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : proliferating cellular nuclear antigen 1
Curator
Summary (TAIR10)
Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.
Computational
Description (TAIR10)
proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink).
Protein Annotations
BioGrid:22490eggNOG:COG0592eggNOG:KOG1636EMBL:AC022464
EMBL:AF083220EMBL:AF462821EMBL:AY086852EMBL:AY098969
EMBL:CP002684EMBL:EU072917EnsemblPlants:AT1G07370EnsemblPlants:AT1G07370.1
entrez:837249EvolutionaryTrace:Q9M7Q7GeneID:837249Genevisible:Q9M7Q7
GO:GO:0003677GO:GO:0005634GO:GO:0005730GO:GO:0005737
GO:GO:0006272GO:GO:0006275GO:GO:0006298GO:GO:0019985
GO:GO:0030337GO:GO:0043626GO:GO:0051726Gramene:AT1G07370.1
HAMAP:MF_00317hmmpanther:PTHR11352HOGENOM:HOG000211098InParanoid:Q9M7Q7
IntAct:Q9M7Q7InterPro:IPR000730InterPro:IPR022648InterPro:IPR022649
InterPro:IPR022659KEGG:ath:AT1G07370KO:K04802OMA:ANVGMVD
PANTHER:PTHR11352PaxDb:Q9M7Q7PDB:2ZVVPDBsum:2ZVV
Pfam:PF00705Pfam:PF02747Pfam:Q9M7Q7PhylomeDB:Q9M7Q7
PRIDE:Q9M7Q7PRINTS:PR00339PRO:PR:Q9M7Q7PROSITE:PS00293
PROSITE:PS01251ProteinModelPortal:Q9M7Q7Proteomes:UP000006548Reactome:R-ATH-110312
Reactome:R-ATH-110314Reactome:R-ATH-110320Reactome:R-ATH-113510Reactome:R-ATH-174411
Reactome:R-ATH-174414Reactome:R-ATH-174417Reactome:R-ATH-174437Reactome:R-ATH-4615885
Reactome:R-ATH-5358565Reactome:R-ATH-5651801Reactome:R-ATH-5655862Reactome:R-ATH-5656121
Reactome:R-ATH-5656169Reactome:R-ATH-5696397Reactome:R-ATH-5696400Reactome:R-ATH-6782135
Reactome:R-ATH-6782210Reactome:R-ATH-69091Reactome:R-ATH-69109Reactome:R-ATH-69166
Reactome:R-ATH-69183Reactome:R-ATH-69205RefSeq:NP_172217.1scanprosite:PS00293
scanprosite:PS01251SMR:Q9M7Q7STRING:3702.AT1G07370.1SUPFAM:SSF55979
TAIR:AT1G07370tair10-symbols:ATPCNA1tair10-symbols:PCNA1TIGRfam:TIGR00590
TIGRFAMs:TIGR00590UniGene:At.11997UniProt:Q9M7Q7
Coordinates (TAIR10) chr1:+:2263204..2264382
Molecular Weight (calculated) 29123.90 Da
IEP (calculated) 4.35
GRAVY (calculated) -0.11
Length 263 amino acids
Sequence (TAIR10)
(BLAST)
001: MLELRLVQGS LLKKVLESIK DLVNDANFDC SSTGFSLQAM DSSHVALVSL LLRSEGFEHY RCDRNLSMGM NLGNMSKMLK CAGNDDIITI KADDGGDTVT
101: FMFESPTQDK IADFEMKLMD IDSEHLGIPD AEYHSIVRMP SNEFSRICKD LSSIGDTVVI SVTKEGVKFS TAGDIGTANI VLRQNTTVDK PEDAIVIEMK
201: EPVSLSFALR YMNSFTKATP LSDTVTISLS SELPVVVEYK VAEMGYIRYY LAPKIEEEED TNP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)