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AT5G66880.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.759
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : sucrose nonfermenting 1(SNF1)-related protein kinase 2.3
Curator
Summary (TAIR10)
encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth.
Computational
Description (TAIR10)
sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (SNRK2.3); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase 2.2 (TAIR:AT3G50500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G66880-MONOMERBioGrid:22064DIP:DIP-48986NEC:2.7.11.1eggNOG:COG0515eggNOG:KOG0583EMBL:AB010700
EMBL:AY093098EMBL:BT002082EMBL:CP002688EMBL:L05562EnsemblPlants:AT5G66880EnsemblPlants:AT5G66880.1entrez:836822
GeneID:836822Genevisible:Q39193GO:GO:0004672GO:GO:0004674GO:GO:0005524GO:GO:0005634GO:GO:0005737
GO:GO:0005829GO:GO:0006970GO:GO:0009414GO:GO:0009651GO:GO:0009737GO:GO:0009738GO:GO:0009739
GO:GO:0010029GO:GO:0016301GO:GO:0035556Gramene:AT5G66880.1gramene_plant_reactome:3899351gramene_plant_reactome:6876986gramene_plant_reactome:6877045
gramene_plant_reactome:6877073gramene_plant_reactome:6877093hmmpanther:PTHR24343hmmpanther:PTHR24343:SF169HOGENOM:HOG000233016InParanoid:Q39193IntAct:Q39193
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441iPTMnet:Q39193KEGG:ath:AT5G66880KO:K14498
OMA:NTGSQFQPaxDb:Q39193PDB:3UC3PDBsum:3UC3Pfam:PF00069Pfam:Q39193Pfscan:PS50011
PhylomeDB:Q39193PIR:S71172PRIDE:Q39193PRO:PR:Q39193PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q39193Proteomes:UP000006548Reactome:R-ATH-163680Reactome:R-ATH-200425Reactome:R-ATH-380972RefSeq:NP_201489.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q39193STRING:3702.AT5G66880.1SUPFAM:SSF56112TAIR:AT5G66880tair10-symbols:SNRK2-3
tair10-symbols:SNRK2.3tair10-symbols:SRK2IUniGene:At.314UniProt:Q39193
Coordinates (TAIR10) chr5:+:26710697..26712732
Molecular Weight (calculated) 41086.90 Da
IEP (calculated) 4.58
GRAVY (calculated) -0.32
Length 361 amino acids
Sequence (TAIR10)
(BLAST)
001: MDRAPVTTGP LDMPIMHDSD RYDFVKDIGS GNFGVARLMR DKLTKELVAV KYIERGDKID ENVQREIINH RSLRHPNIVR FKEVILTPTH LAIIMEYASG
101: GELYERICNA GRFSEDEARF FFQQLLSGVS YCHSMQICHR DLKLENTLLD GSPAPRLKIC DFGYSKSSVL HSQPKSTVGT PAYIAPEVLL RQEYDGKIAD
201: VWSCGVTLYV MLVGAYPFED PEEPRDYRKT IQRILSVKYS IPDDIRISPE CCHLISRIFV ADPATRISIP EIKTHSWFLK NLPADLMNES NTGSQFQEPE
301: QPMQSLDTIM QIISEATIPA VRNRCLDDFM TDNLDLDDDM DDFDSESEID IDSSGEIVYA L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)