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AT3G43440.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.720
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : jasmonate-zim-domain protein 11
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
jasmonate-zim-domain protein 11 (JAZ11); CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 12 (TAIR:AT5G20900.1); Has 581 Blast hits to 344 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 581; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:8748DIP:DIP-53278NDNASU:823426EMBL:AL138644
EMBL:BT015154EMBL:BT015661EMBL:CP002686EnsemblPlants:AT3G43440
EnsemblPlants:AT3G43440.1entrez:823426ExpressionAtlas:Q9M246GeneID:823426
GO:GO:0003714GO:GO:0005634GO:GO:0006351GO:GO:0006355
GO:GO:0006952GO:GO:0009611GO:GO:0031347GO:GO:1903507
GO:GO:2000022hmmpanther:PTHR33077hmmpanther:PTHR33077:SF5HOGENOM:HOG000154575
InParanoid:Q9M246IntAct:Q9M246InterPro:IPR010399InterPro:IPR018467
iPTMnet:Q9M246OMA:VPAQKVQPaxDb:Q9M246Pfam:PF06200
Pfam:PF09425Pfam:Q9M246Pfscan:PS51320PhylomeDB:Q9M246
PIR:T47386PRIDE:Q9M246PRO:PR:Q9M246PROSITE:PS51320
Proteomes:UP000006548RefSeq:NP_189930.1SMART:SM00979STRING:3702.AT3G43440.1
TAIR:AT3G43440tair10-symbols:JAZ11tair10-symbols:TIFY3AUniGene:At.36272
UniProt:Q9M246
Coordinates (TAIR10) chr3:+:15367670..15369774
Molecular Weight (calculated) 25842.90 Da
IEP (calculated) 10.71
GRAVY (calculated) -0.16
Length 238 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEVNGDFPV PSFADGTGSV SAGLDLLVER SIHEARSTEP DASTQLTIIF GGSCRVFNGV PAQKVQEIIR IAFAGKQTKN VTGINPALNR ALSFSTVADL
101: PIARRRSLQR FLEKRRDRST KPDGSMILPS QLTIIFGGSF SVFDGIPAEK VQEILHIAAA AKATETINLT SINPALKRAI SFSNASTVAC VSTADVPIAR
201: RRSLQRFFEK RRHRFVHTKP YSATTSEADK NETSPIVT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)