AT1G56700.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:golgi 0.681 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Peptidase C15, pyroglutamyl peptidase I-like | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Peptidase C15, pyroglutamyl peptidase I-like; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C15, pyroglutamyl peptidase I (InterPro:IPR000816), Peptidase C15, pyroglutamyl peptidase I-like (InterPro:IPR016125); BEST Arabidopsis thaliana protein match is: Peptidase C15, pyroglutamyl peptidase I-like (TAIR:AT1G23440.1); Has 2025 Blast hits to 2024 proteins in 879 species: Archae - 113; Bacteria - 1588; Metazoa - 114; Fungi - 17; Plants - 100; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:21256743..21257640 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 24047.70 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.35 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||
Length | 219 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGSEGPTGVT IHITGFKKFH GVAENPTEKM ANNLKEYLAK NCVSKDVNLG SCTVLETAGQ GALASLYQLL QSAVNTKESE SLTGKTIWVH FGVNSGATKF 101: AIEQQAVNEA TFRCPDELGW KPQNLPIVPS DGPISTVRKT NLPVEEITKA LEKNGFEVIT SDDAGRFVCN YVYYHSLRFA EQNKTRSLFV HVPLFVAVDE 201: ETQMRFTVSL LEVLASICK |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)