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AT4G02050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sugar transporter protein 7
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
sugar transporter protein 7 (STP7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G26340.1); Has 26348 Blast hits to 25870 proteins in 1897 species: Archae - 376; Bacteria - 11847; Metazoa - 3711; Fungi - 6732; Plants - 2516; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNQKeggNOG:KOG0254EMBL:AF001308EMBL:AF001535
EMBL:AJ001660EMBL:AJ344331EMBL:AL161493EMBL:CP002687
EnsemblPlants:AT4G02050EnsemblPlants:AT4G02050.1entrez:828154GeneID:828154
Genevisible:O04249GO:GO:0005351GO:GO:0005355GO:GO:0005886
GO:GO:0005887GO:GO:0015992GO:GO:0035428GO:GO:0046323
GO:GO:1904659Gramene:AT4G02050.1hmmpanther:PTHR23500hmmpanther:PTHR23500:SF12
HOGENOM:HOG000202867InParanoid:O04249InterPro:IPR003663InterPro:IPR005828
InterPro:IPR005829InterPro:IPR020846KEGG:ath:AT4G02050OMA:GLLCAFK
PaxDb:O04249Pfam:O04249Pfam:PF00083Pfscan:PS50850
PhylomeDB:O04249PIR:T01506PRIDE:O04249PRINTS:PR00171
PRO:PR:O04249PROSITE:PS00216PROSITE:PS00217PROSITE:PS50850
ProteinModelPortal:O04249Proteomes:UP000006548RefSeq:NP_192114.1scanprosite:PS00216
scanprosite:PS00217SMR:O04249STRING:3702.AT4G02050.1SUPFAM:SSF103473
TAIR:AT4G02050tair10-symbols:STP7TIGRfam:TIGR00879TIGRFAMs:TIGR00879
TMHMM:TMhelixUniGene:At.3860UniGene:At.66610UniProt:O04249
Coordinates (TAIR10) chr4:-:898387..900095
Molecular Weight (calculated) 55831.90 Da
IEP (calculated) 8.78
GRAVY (calculated) 0.51
Length 513 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGGSFGPTG VAKERAEQYQ GKVTSYVIIA CLVAAIGGSI FGYDIGISGG VTSMDEFLEE FFHTVYEKKK QAHESNYCKY DNQGLAAFTS SLYLAGLVST
101: LVASPITRNY GRRASIVCGG ISFLIGSGLN AGAVNLAMLL AGRIMLGVGI GFGNQAVPLY LSEVAPTHLR GGLNMMFQLA TTIGIFTANM VNYGTQQLKP
201: WGWRLSLGLA AFPALLMTLG GYFLPETPNS LVERGLTERG RRVLVKLRGT ENVNAELQDM VDASELANSI KHPFRNILQK RHRPQLVMAI CMPMFQILTG
301: INSILFYAPV LFQTMGFGGN ASLYSSALTG AVLVLSTFIS IGLVDRLGRR ALLITGGIQM IICQVIVAVI LGVKFGDNQE LSKGYSVIVV IFICLFVVAF
401: GWSWGPLGWT IPSEIFPLET RSAGQSITVA VNLLFTFIIA QAFLGLLCAF KFGIFLFFAG WVTVMTIFVY FLLPETKGVP IEEMTLLWSK HWFWKKVLPD
501: ATNLEDESKN VSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)