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AT3G17790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : purple acid phosphatase 17
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
purple acid phosphatase 17 (PAP17); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 3 (TAIR:AT1G14700.1); Has 1229 Blast hits to 1218 proteins in 312 species: Archae - 4; Bacteria - 345; Metazoa - 336; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G17790-MONOMEREC:1.11.1.7EC:3.1.3.2eggNOG:COG1409
eggNOG:KOG2679EMBL:AB019230EMBL:AJ133747EMBL:AJ243527
EMBL:AK228106EMBL:AY084629EMBL:AY818189EMBL:BT003135
EMBL:CP002686EnsemblPlants:AT3G17790EnsemblPlants:AT3G17790.1entrez:821047
Gene3D:3.60.21.10GeneID:821047Genevisible:Q9SCX8GO:GO:0003993
GO:GO:0004601GO:GO:0005576GO:GO:0009986GO:GO:0016311
GO:GO:0016791GO:GO:0030643GO:GO:0042542GO:GO:0046872
Gramene:AT3G17790.1hmmpanther:PTHR10161hmmpanther:PTHR10161:SF14HOGENOM:HOG000239892
InParanoid:Q9SCX8InterPro:IPR004843InterPro:IPR024927InterPro:IPR029052
KEGG:00627+3.1.3.2KEGG:ath:AT3G17790KO:K14379OMA:MTANATE
PaxDb:Q9SCX8Pfam:PF00149Pfam:Q9SCX8PhylomeDB:Q9SCX8
PIRSF:PIRSF000898PRIDE:Q9SCX8PRO:PR:Q9SCX8ProteinModelPortal:Q9SCX8
Proteomes:UP000006548Reactome:R-ATH-196843RefSeq:NP_566587.1SMR:Q9SCX8
STRING:3702.AT3G17790.1SUPFAM:SSF56300TAIR:AT3G17790tair10-symbols:ATACP5
tair10-symbols:ATPAP17tair10-symbols:PAP17TMHMM:TMhelixUniGene:At.22111
UniGene:At.71032UniGene:At.74878UniGene:At.74926UniProt:Q9SCX8
Coordinates (TAIR10) chr3:+:6089779..6090988
Molecular Weight (calculated) 38299.10 Da
IEP (calculated) 5.89
GRAVY (calculated) -0.26
Length 338 amino acids
Sequence (TAIR10)
(BLAST)
001: MNSGRRSLMS ATASLSLLLC IFTTFVVVSN GELQRFIEPA KSDGSVSFIV IGDWGRRGSF NQSLVAYQMG KIGEKIDLDF VVSTGDNFYD NGLFSEHDPN
101: FEQSFSNIYT APSLQKQWYS VLGNHDYRGD AEAQLSSVLR EIDSRWICLR SFVVDAELVE MFFVDTTPFV KEYYTEADGH SYDWRAVPSR NSYVKALLRD
201: LEVSLKSSKA RWKIVVGHHA MRSIGHHGDT KELNEELLPI LKENGVDLYM NGHDHCLQHM SDEDSPIQFL TSGAGSKAWR GDINPVTINP KLLKFYYDGQ
301: GFMSARFTHS DAEIVFYDVF GEILHKWVTS KQLLHSSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)