AT3G47420.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:vacuole 0.574 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : phosphate starvation-induced gene 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a Pi starvation-responsive protein AtPS3. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
phosphate starvation-induced gene 3 (PS3); FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G30560.1); Has 26325 Blast hits to 26083 proteins in 2250 species: Archae - 498; Bacteria - 20836; Metazoa - 940; Fungi - 2597; Plants - 303; Viruses - 0; Other Eukaryotes - 1151 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:17472541..17474209 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 56312.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.32 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.42 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 523 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGSLMQSEPE MEKKPIGIRF LERIKGSKLS YSAYQAIVLI VTFLAYASYH AARKTTSIVK SALDPQSPDT GLNSLLLRFT SFGSSVKEEG GWAPFNGPDG 101: TVLLGEIDVA FLAVYAFGMY FAGHLGDRMN LRIFLTVGMI GTGLFTSLFG VGYWGNIHSF YYFLIMQMLA GLFQSSGWPS VVAVVGNWFN KKKRGLIMGI 201: WNAHTSVGNI TGSLIAAAML RYGWGWSFVV PGVIIVVIGL VNYAFLPVSP ENVGAERDEV LDSSSEKIGN SVNEPLLLSS SDSETDDKKR AVGFIEAWRI 301: PGVAPFALCL FFAKLVAYTF LYWLPFYVSH TAIEGEYLSD ETAGNLSTMF DVGGVVGGIM AGYISDRIGA RAITAASFMY CSIPALFFYR SYGHVSLLAN 401: ASLMFLTGML VNGPYALITT AVSADLGTHS SLKGNSRALA TVTAIIDGTG SVGAAVGPLL TGYISSRGSW TAVFTMLMGA AFVAGLLLTR LVMAEVAEKI 501: AESRPSEECR SPVDYVQDHV MEV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)