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AT3G47420.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 0.574
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphate starvation-induced gene 3
Curator
Summary (TAIR10)
Encodes a Pi starvation-responsive protein AtPS3.
Computational
Description (TAIR10)
phosphate starvation-induced gene 3 (PS3); FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G30560.1); Has 26325 Blast hits to 26083 proteins in 2250 species: Archae - 498; Bacteria - 20836; Metazoa - 940; Fungi - 2597; Plants - 303; Viruses - 0; Other Eukaryotes - 1151 (source: NCBI BLink).
Protein Annotations
BRENDA:3.6.3.20eggNOG:COG2271eggNOG:ENOG410IP3ZEMBL:AF325105
EMBL:AF360170EMBL:AL096860EMBL:CP002686EnsemblPlants:AT3G47420
EnsemblPlants:AT3G47420.1entrez:823896GeneID:823896Genevisible:Q9C5L3
GO:GO:0006820GO:GO:0008643GO:GO:0016021GO:GO:0022857
GO:GO:0055062GO:GO:0055085Gramene:AT3G47420.1hmmpanther:PTHR11662
hmmpanther:PTHR11662:SF302HOGENOM:HOG000230522InParanoid:Q9C5L3InterPro:IPR000849
InterPro:IPR011701InterPro:IPR020846iPTMnet:Q9C5L3KEGG:ath:AT3G47420
KO:K13783OMA:WCNWPPFPaxDb:Q9C5L3Pfam:PF07690
Pfam:Q9C5L3Pfscan:PS50850PhylomeDB:Q9C5L3PIR:T12997
PIRSF:PIRSF002808PRIDE:Q9C5L3PRO:PR:Q9C5L3PROSITE:PS50850
ProteinModelPortal:Q9C5L3Proteomes:UP000006548RefSeq:NP_566891.1STRING:3702.AT3G47420.1
SUPFAM:SSF103473TAIR:AT3G47420tair10-symbols:ATPS3tair10-symbols:PS3
TMHMM:TMhelixUniGene:At.24003UniProt:Q9C5L3
Coordinates (TAIR10) chr3:-:17472541..17474209
Molecular Weight (calculated) 56312.30 Da
IEP (calculated) 6.32
GRAVY (calculated) 0.42
Length 523 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSLMQSEPE MEKKPIGIRF LERIKGSKLS YSAYQAIVLI VTFLAYASYH AARKTTSIVK SALDPQSPDT GLNSLLLRFT SFGSSVKEEG GWAPFNGPDG
101: TVLLGEIDVA FLAVYAFGMY FAGHLGDRMN LRIFLTVGMI GTGLFTSLFG VGYWGNIHSF YYFLIMQMLA GLFQSSGWPS VVAVVGNWFN KKKRGLIMGI
201: WNAHTSVGNI TGSLIAAAML RYGWGWSFVV PGVIIVVIGL VNYAFLPVSP ENVGAERDEV LDSSSEKIGN SVNEPLLLSS SDSETDDKKR AVGFIEAWRI
301: PGVAPFALCL FFAKLVAYTF LYWLPFYVSH TAIEGEYLSD ETAGNLSTMF DVGGVVGGIM AGYISDRIGA RAITAASFMY CSIPALFFYR SYGHVSLLAN
401: ASLMFLTGML VNGPYALITT AVSADLGTHS SLKGNSRALA TVTAIIDGTG SVGAAVGPLL TGYISSRGSW TAVFTMLMGA AFVAGLLLTR LVMAEVAEKI
501: AESRPSEECR SPVDYVQDHV MEV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)