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AT4G33030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : sulfoquinovosyldiacylglycerol 1
Curator
Summary (TAIR10)
involved in sulfolipid biosynthesis
Computational
Description (TAIR10)
sulfoquinovosyldiacylglycerol 1 (SQD1); FUNCTIONS IN: UDPsulfoquinovose synthase activity, sulfotransferase activity, zinc ion binding; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 10748 Blast hits to 10748 proteins in 2398 species: Archae - 273; Bacteria - 7931; Metazoa - 289; Fungi - 89; Plants - 466; Viruses - 5; Other Eukaryotes - 1695 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:MONOMER-1201BioCyc:RETL1328306-WGS:GSTH-3531-MONOMERBioGrid:14725BRENDA:3.13.1.1
EC:3.13.1.1eggNOG:COG1087eggNOG:KOG1371EMBL:AF022082
EMBL:AF380641EMBL:AL031804EMBL:AL161582EMBL:AY113071
EMBL:CP002687EnsemblPlants:AT4G33030EnsemblPlants:AT4G33030.1entrez:829440
EvolutionaryTrace:O48917Gene3D:3.40.50.720GeneID:829440Genevisible:O48917
GO:GO:0008146GO:GO:0008270GO:GO:0009247GO:GO:0009507
GO:GO:0016036GO:GO:0046507GO:GO:0050662Gramene:AT4G33030.1
hmmpanther:PTHR10366hmmpanther:PTHR10366:SF337HOGENOM:HOG000014371InParanoid:O48917
IntAct:O48917InterPro:IPR001509InterPro:IPR016040KEGG:ath:AT4G33030
KO:K06118OMA:EEHYYNPPaxDb:O48917PDB:1I24
PDB:1I2BPDB:1I2CPDB:1QRRPDBsum:1I24
PDBsum:1I2BPDBsum:1I2CPDBsum:1QRRPfam:O48917
Pfam:PF01370PhylomeDB:O48917PIR:T05311PRIDE:O48917
PRO:PR:O48917ProteinModelPortal:O48917Proteomes:UP000006548RefSeq:NP_195029.1
SMR:O48917STRING:3702.AT4G33030.1SUPFAM:SSF51735TAIR:AT4G33030
tair10-symbols:SQD1UniGene:At.2479UniProt:O48917
Coordinates (TAIR10) chr4:+:15936051..15937566
Molecular Weight (calculated) 53116.40 Da
IEP (calculated) 8.31
GRAVY (calculated) -0.27
Length 477 amino acids
Sequence (TAIR10)
(BLAST)
001: MAHLLSASCP SVISLSSSSS KNSVKPFVSG QTFFNAQLLS RSSLKGLLFQ EKKPRKSCVF RATAVPITQQ APPETSTNNS SSKPKRVMVI GGDGYCGWAT
101: ALHLSKKNYE VCIVDNLVRR LFDHQLGLES LTPIASIHDR ISRWKALTGK SIELYVGDIC DFEFLAESFK SFEPDSVVHF GEQRSAPYSM IDRSRAVYTQ
201: HNNVIGTLNV LFAIKEFGEE CHLVKLGTMG EYGTPNIDIE EGYITITHNG RTDTLPYPKQ ASSFYHLSKV HDSHNIAFTC KAWGIRATDL NQGVVYGVKT
301: DETEMHEELR NRLDYDAVFG TALNRFCVQA AVGHPLTVYG KGGQTRGYLD IRDTVQCVEI AIANPAKAGE FRVFNQFTEQ FSVNELASLV TKAGSKLGLD
401: VKKMTVPNPR VEAEEHYYNA KHTKLMELGL EPHYLSDSLL DSLLNFAVQF KDRVDTKQIM PSVSWKKIGV KTKSMTT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)