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AT3G61070.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24130194 (2013): peroxisome
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23750852 (2013): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:21311031 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
  • PMID:15276431 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : peroxin 11E
Curator
Summary (TAIR10)
member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.
Computational
Description (TAIR10)
peroxin 11E (PEX11E); INVOLVED IN: response to light stimulus, peroxisome fission, peroxisome organization; LOCATED IN: mitochondrion, peroxisomal membrane, integral to peroxisomal membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 282 Blast hits to 282 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 35; Plants - 180; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Protein Annotations
BioGrid:10593eggNOG:ENOG4111NS6eggNOG:KOG4186EMBL:AJ520105
EMBL:AL358732EMBL:BT002962EMBL:BT004439EMBL:CP002686
EnsemblPlants:AT3G61070EnsemblPlants:AT3G61070.1EnsemblPlants:AT3G61070.2EnsemblPlants:AT3G61070.3
entrez:825279GeneID:825279Genevisible:Q84JW1GO:GO:0005739
GO:GO:0005777GO:GO:0005779GO:GO:0007031GO:GO:0007623
GO:GO:0016559GO:GO:0042802GO:GO:0044375Gramene:AT3G61070.1
Gramene:AT3G61070.2Gramene:AT3G61070.3hmmpanther:PTHR12652hmmpanther:PTHR12652:SF16
HOGENOM:HOG000029130InParanoid:Q84JW1InterPro:IPR008733KEGG:ath:AT3G61070
OMA:FCWLGSSPaxDb:Q84JW1Pfam:PF05648Pfam:Q84JW1
PhylomeDB:Q84JW1PIR:T50528PRIDE:Q84JW1PRO:PR:Q84JW1
Proteomes:UP000006548RefSeq:NP_001078322.1RefSeq:NP_001190149.1RefSeq:NP_191666.2
STRING:3702.AT3G61070.1SwissPalm:Q84JW1TAIR:AT3G61070tair10-symbols:PEX11E
UniGene:At.44960UniProt:Q84JW1
Coordinates (TAIR10) chr3:-:22604873..22606159
Molecular Weight (calculated) 25513.60 Da
IEP (calculated) 10.52
GRAVY (calculated) 0.05
Length 231 amino acids
Sequence (TAIR10)
(BLAST)
001: MTTLDLTRAE LALIVLYLNK AEARDKICRA IQYGSKFLSG GQPGTAQTVD KNTSLARKVF RLFKFVNDFH GLISPVPKGT PLPLVLLGKS KNALLSTFLF
101: LDQIVWLGRS GIYKNKERTE LLGRISLFCW LGSSVCTSAV EIGELGRLSS SMKKMEKELK ADDELYRAKL QKSNDRTLAL IKSSMDIIVA IGLLQLAPKT
201: ISPRVTGAFG FTTSLISCYQ LLPSRPKLKT P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)