suba logo
AT1G44170.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25641898 (2015): plasma membrane
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23323832 (2013): plasma membrane
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:22574745 (2012): mitochondrion
  • PMID:22430844 (2012): Golgi
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:19334764 (2009): plasma membrane
  • PMID:16618929 (2006): endoplasmic reticulum
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aldehyde dehydrogenase 3H1
Curator
Summary (TAIR10)
Encodes a protein similar to the aldehyde dehydrogenase cp-ADH from C.plantagineum. Constitutively expressed at low levels.
Computational
Description (TAIR10)
aldehyde dehydrogenase 3H1 (ALDH3H1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum, plastid, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3I1 (TAIR:AT4G34240.1); Has 54230 Blast hits to 54179 proteins in 2948 species: Archae - 469; Bacteria - 33122; Metazoa - 2435; Fungi - 2121; Plants - 998; Viruses - 0; Other Eukaryotes - 15085 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G44170-MONOMERBioCyc:ARA:GQT-1341-MONOMERBioCyc:ARA:GQT-1342-MONOMEREC:1.2.1.3
eggNOG:COG1012eggNOG:KOG2456EMBL:AC074228EMBL:AJ585241
EMBL:AY072122EMBL:AY084648EMBL:CP002684EnsemblPlants:AT1G44170
EnsemblPlants:AT1G44170.1EnsemblPlants:AT1G44170.2EnsemblPlants:AT1G44170.3entrez:841020
ExpressionAtlas:Q70DU8Gene3D:3.40.309.10Gene3D:3.40.605.10GeneID:841020
Genevisible:Q70DU8GO:GO:0004028GO:GO:0004029GO:GO:0004030
GO:GO:0005773GO:GO:0005783GO:GO:0005794GO:GO:0006081
GO:GO:0009269GO:GO:0009506GO:GO:0009536GO:GO:0009651
GO:GO:0009737GO:GO:0016020gramene_pathway:1.2.1.27gramene_pathway:VALDEG-PWY
hmmpanther:PTHR11699hmmpanther:PTHR11699:SF171HOGENOM:HOG000271515InParanoid:Q70DU8
InterPro:IPR012394InterPro:IPR015590InterPro:IPR016161InterPro:IPR016162
InterPro:IPR016163InterPro:IPR029510iPTMnet:Q70DU8KEGG:ath:AT1G44170
KO:K00128OMA:ACKWDHIPaxDb:Q70DU8Pfam:PF00171
Pfam:Q70DU8PhylomeDB:Q70DU8PIR:H96505PIRSF:PIRSF036492
PRIDE:Q70DU8PRO:PR:Q70DU8PROSITE:PS00687ProteinModelPortal:Q70DU8
Proteomes:UP000006548Reactome:R-ATH-1660661Reactome:R-ATH-211945RefSeq:NP_001077676.1
RefSeq:NP_175081.1RefSeq:NP_849770.1scanprosite:PS00687SMR:Q70DU8
STRING:3702.AT1G44170.1SUPFAM:SSF53720TAIR:AT1G44170tair10-symbols:ALDH3H1
tair10-symbols:ALDH4UniGene:At.17189UniGene:At.48278UniProt:Q70DU8
Coordinates (TAIR10) chr1:-:16796564..16800031
Molecular Weight (calculated) 53161.70 Da
IEP (calculated) 8.65
GRAVY (calculated) 0.05
Length 484 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAKKVFGSA EASNLVTELR RSFDDGVTRG YEWRVTQLKK LMIICDNHEP EIVAALRDDL GKPELESSVY EVSLLRNSIK LALKQLKNWM APEKAKTSLT
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)