suba logo
AT2G14170.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30135097 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:21311031 (2011): mitochondrion
  • PMID:14764908 (2004): mitochondrion
  • PMID:14671022 (2004): mitochondrion
  • PMID:12492832 (2002): mitochondrion
  • PMID:11743115 (2001): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aldehyde dehydrogenase 6B2
Curator
Summary (TAIR10)
Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase
Computational
Description (TAIR10)
aldehyde dehydrogenase 6B2 (ALDH6B2); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, copper ion binding; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57810 Blast hits to 57524 proteins in 2942 species: Archae - 475; Bacteria - 33374; Metazoa - 2527; Fungi - 2116; Plants - 1215; Viruses - 0; Other Eukaryotes - 18103 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G14170-MONOMERBioCyc:ARA:GQT-2139-MONOMERBioCyc:ARA:GQT-2140-MONOMEREC:1.2.1.27
eggNOG:ENOG410XNP1eggNOG:KOG2449EMBL:AC007197EMBL:AK230004
EMBL:CP002685EnsemblPlants:AT2G14170EnsemblPlants:AT2G14170.1entrez:815903
ExpressionAtlas:Q0WM29Gene3D:3.40.309.10Gene3D:3.40.605.10GeneID:815903
Genevisible:Q0WM29GO:GO:0004029GO:GO:0004491GO:GO:0005507
GO:GO:0005739GO:GO:0006979GO:GO:0018478gramene_pathway:1.2.1.27
gramene_pathway:VALDEG-PWYhmmpanther:PTHR11699hmmpanther:PTHR11699:SF183HOGENOM:HOG000271507
InParanoid:Q0WM29InterPro:IPR010061InterPro:IPR015590InterPro:IPR016160
InterPro:IPR016161InterPro:IPR016162InterPro:IPR016163KEGG:00280+1.2.1.27
KEGG:00410+1.2.1.18KEGG:00562+1.2.1.18KEGG:00640+1.2.1.18+1.2.1.27OMA:SNVKPNM
PANTHER:PTHR11699:SF183PaxDb:Q0WM29Pfam:PF00171Pfam:Q0WM29
PhylomeDB:Q0WM29PIR:H84514PRIDE:Q0WM29PRO:PR:Q0WM29
PROSITE:PS00070ProteinModelPortal:Q0WM29Proteomes:UP000006548Reactome:R-ATH-70895
RefSeq:NP_179032.1scanprosite:PS00070SMR:Q0WM29STRING:3702.AT2G14170.1
SUPFAM:SSF53720TAIR:AT2G14170tair10-symbols:ALDH6B2TIGRfam:TIGR01722
TIGRFAMs:TIGR01722UniGene:At.43851UniProt:Q0WM29
Coordinates (TAIR10) chr2:-:5977727..5981899
Molecular Weight (calculated) 65930.20 Da
IEP (calculated) 8.79
GRAVY (calculated) -0.18
Length 607 amino acids
Sequence (TAIR10)
(BLAST)
001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)