AT1G80210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.968 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Mov34/MPN/PAD-1 family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Mov34/MPN/PAD-1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G06820.2); Has 1011 Blast hits to 924 proteins in 229 species: Archae - 0; Bacteria - 3; Metazoa - 473; Fungi - 224; Plants - 189; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:30163357..30165628 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44486.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.14 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||
| Length | 406 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSLTCVNMSE DVWLTCLTHA LSTETEEIMG LLLGDIEYSK DGGSATAMIW GASPQSRSDR QKDRVETNPE QLAAASAQAD RMTISTGRTT RVIGWYHSHP 101: HITVLPSHVD VRTQAMYQLL DSGFIGLIFS CFSEDANKVG RIQVIAFQSS DGKPNSIPKS MSLVLANKDS VIDLESSFSS SDSIYQRSSS ARGDNPELDT 201: SDTATTSGSK GGGRVSDFEA FFVNNTEANN TRRDGTSGNY SSTAIEIDSM DMSESMQEAM HRSNLETSGV GYVRKEVPLH VLPTSSLLQL NSPLASFKSL 301: QRVLYEEERA AYHQSVQQSK RDGRVHPLAF IHNTSTYQAS MCKLIEYCLS PAINALQDRL KENKIRLAML MDEAEVLEAQ KLKGAETSGG ASRLVHGSGS 401: RSRRRS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)