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AT3G06820.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mov34/MPN/PAD-1 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mov34/MPN/PAD-1 family protein; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT1G80210.1); Has 413 Blast hits to 335 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 75; Plants - 96; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1310eggNOG:KOG1555EMBL:CP002686EnsemblPlants:AT3G06820
EnsemblPlants:AT3G06820.1entrez:819866ExpressionAtlas:A8MRH7GeneID:819866
Gramene:AT3G06820.1hmmpanther:PTHR10410hmmpanther:PTHR10410:SF2HOGENOM:HOG000005846
InterPro:IPR000555iPTMnet:A8MRH7PaxDb:A8MRH7Pfam:PF01398
PhylomeDB:A8MRH7PRIDE:A8MRH7ProteinModelPortal:A8MRH7Proteomes:UP000006548
RefSeq:NP_187338.3SMR:A8MRH7STRING:3702.AT3G06820.2SUPFAM:0048572
TAIR:AT3G06820tair10-symbols:AtBRCC36Btair10-symbols:BRCC36BUniGene:At.40457
UniProt:A8MRH7
Coordinates (TAIR10) chr3:-:2151027..2152659
Molecular Weight (calculated) 35560.00 Da
IEP (calculated) 7.71
GRAVY (calculated) -0.41
Length 324 amino acids
Sequence (TAIR10)
(BLAST)
001: MTISTGRTTR VIGWYHSHPH ITVLPSHVDV RTQAMYQLLD SGFIGLIFSC FSEDANKVGR IQVIAFQSSD GKPNSIPKSM SLVLANKDSV IDIESSSSSS
101: DSIYQRSSSS KPELDTIDTA TTSGSKGGGR VSDFGPFFTN NIEANITGRD ETHKSGNLSS TTIGIDSMDM SESMQEAMLR SNLDTSGAGY VRKEVPLHVL
201: PTSSLLPVNS PLASFKSLQR VLYEEERAAY YQSVQQNMRD GRVHPLAFIH NTSTYQASMC KLIEYCLSPA INALQDRQKE NKIRLAMLMD EAEVLEAQKL
301: KGAETSRRPS HLVHGSGSRS RRGS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)