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AT4G27920.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.654
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : PYR1-like 10
Curator
Summary (TAIR10)
Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.
Computational
Description (TAIR10)
PYR1-like 10 (PYL10); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: regulatory components of ABA receptor 3 (TAIR:AT5G53160.2); Has 399 Blast hits to 399 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
BioGrid:14192eggNOG:ENOG410JX3NeggNOG:ENOG41104BSEMBL:AL035524
EMBL:AL161572EMBL:AY142526EMBL:CP002687EnsemblPlants:AT4G27920
EnsemblPlants:AT4G27920.1entrez:828905EvolutionaryTrace:Q8H1R0Gene3D:3.30.530.20
GeneID:828905GO:GO:0004864GO:GO:0004872GO:GO:0005634
GO:GO:0005737GO:GO:0005886GO:GO:0009738GO:GO:0010427
GO:GO:0042803GO:GO:0043086GO:GO:0080163Gramene:AT4G27920.1
hmmpanther:PTHR31213hmmpanther:PTHR31213:SF12HOGENOM:HOG000238422InParanoid:Q8H1R0
IntAct:Q8H1R0InterPro:IPR019587InterPro:IPR023393iPTMnet:Q8H1R0
KEGG:ath:AT4G27920KO:K14496OMA:HRHELVEPaxDb:Q8H1R0
PDB:3R6PPDB:3RT0PDB:3RT2PDB:3UQH
PDBsum:3R6PPDBsum:3RT0PDBsum:3RT2PDBsum:3UQH
Pfam:PF10604Pfam:Q8H1R0PhylomeDB:Q8H1R0PIR:T02893
PRO:PR:Q8H1R0ProteinModelPortal:Q8H1R0Proteomes:UP000006548RefSeq:NP_194521.2
SMR:Q8H1R0STRING:3702.AT4G27920.1SUPFAM:SSF55961TAIR:AT4G27920
tair10-symbols:PYL10tair10-symbols:RCAR4UniGene:At.32062UniProt:Q8H1R0
Coordinates (TAIR10) chr4:+:13901220..13901939
Molecular Weight (calculated) 20642.70 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.39
Length 183 amino acids
Sequence (TAIR10)
(BLAST)
001: MNGDETKKVE SEYIKKHHRH ELVESQCSST LVKHIKAPLH LVWSIVRRFD EPQKYKPFIS RCVVQGKKLE VGSVREVDLK SGLPATKSTE VLEILDDNEH
101: ILGIRIVGGD HRLKNYSSTI SLHSETIDGK TGTLAIESFV VDVPEGNTKE ETCFFVEALI QCNLNSLADV TERLQAESME KKI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)