AT5G61570.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.653 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G07620.1); Has 83143 Blast hits to 82386 proteins in 2669 species: Archae - 65; Bacteria - 8087; Metazoa - 31019; Fungi - 5483; Plants - 27570; Viruses - 202; Other Eukaryotes - 10717 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:24758507..24760201 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40247.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.50 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||
| Length | 361 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRKSHLVKLI LAVSLPTTFL IMIAIIIIFI FCRRTTTETN EVQYDVESPY EKQEFSDNGS ETEEELIIFN GGEDLTICDI LDAPGEVIGK SSYGTLYKAT 101: LQRSGKVRVL RFLRPLCAVN SDSKEFNGVI ESLGFVRHDN LVPLLGFYVG NRGEKLMIHP FFGSSGNLSA FIKFLAGGDV DAHKWSNILS ITIGIAKALD 201: HLHTGMQKPI VHGNLKSKNV LLDKSFRPRV SDFGLHLLLN LAAGQEVLEA SAAEGYKAPE LIKMKEVSKE SDVYSFGVIM LELVSGKEPT NKNPTGSVLD 301: RNRLSDLYRP EIIRRCLKDG NGVTEECVLE YFQLAMSCCS PSPTLRPSFK QVLRKLEEIR K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)