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AT2G41330.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glutaredoxin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1); Has 590 Blast hits to 589 proteins in 102 species: Archae - 0; Bacteria - 67; Metazoa - 107; Fungi - 0; Plants - 381; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111HAIeggNOG:KOG2824EMBL:AC005662EMBL:AK221514
EMBL:AY074644EMBL:CP002685EnsemblPlants:AT2G41330EnsemblPlants:AT2G41330.1
entrez:818731Gene3D:3.40.30.10GeneID:818731GO:GO:0005623
GO:GO:0009055GO:GO:0015035GO:GO:0045454Gramene:AT2G41330.1
hmmpanther:PTHR10168hmmpanther:PTHR10168:SF70HOGENOM:HOG000153219InterPro:IPR002109
InterPro:IPR012336KEGG:ath:AT2G41330OMA:DSEYRKEPfam:PF00462
Pfscan:PS51354PhylomeDB:Q9ZVB8PIR:D84840PROSITE:PS51354
Proteomes:UP000006548RefSeq:NP_181664.1SMR:Q9ZVB8SUPFAM:SSF52833
TAIR:AT2G41330UniGene:At.37020UniProt:Q9ZVB8
Coordinates (TAIR10) chr2:+:17227067..17228275
Molecular Weight (calculated) 44389.90 Da
IEP (calculated) 4.95
GRAVY (calculated) -0.55
Length 402 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSSVSKTAS SASASSITSI LNSPPETEFN IPSSSVPKAF TFPMPSIHHP PAKKGDTHHF VSLTSTTYGS LVLDDRQTLP HISVSGKSNK KMPETEEARD
101: SFSPDSVINT WELMNDLDDE FDSANSDTSK SNSVVNLDSF SKPITNRDVV INGSAYGSYE DEEDWRLLPF KPKQPLWKHM SEESFLSDLD PNIISSYKRA
201: LSSKQLGKNS SNGHSNHSVL VSLPEYVSSS PLSSQTSEKD QEKPRLLEKE DNENKIVVYF TSLRGIRKTY EDCCCVRAIL RGFQVAVEER DISMDSKYRK
301: ELQNALGEEK PVCLPQVFIR GVRIGGIEEI KILNDGGELA EMLKDFPACE SIGACDSCGD ARFVPCTNCG GSTKVFEEQE DGFKRCNGCN ENGLVRCNKC
401: CL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)