suba logo
AT3G57070.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 0.925
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Glutaredoxin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT2G41330.1); Has 1224 Blast hits to 656 proteins in 101 species: Archae - 0; Bacteria - 41; Metazoa - 125; Fungi - 4; Plants - 389; Viruses - 0; Other Eukaryotes - 665 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111HAIeggNOG:KOG2824EMBL:AL138655EMBL:CP002686
EnsemblPlants:AT3G57070EnsemblPlants:AT3G57070.1entrez:824874Gene3D:3.40.30.10
GeneID:824874GO:GO:0005623GO:GO:0009055GO:GO:0015035
GO:GO:0045454Gramene:AT3G57070.1hmmpanther:PTHR10168hmmpanther:PTHR10168:SF70
HOGENOM:HOG000153219InterPro:IPR002109InterPro:IPR012336KEGG:ath:AT3G57070
OMA:YKESEDCPfam:PF00462Pfscan:PS51354PhylomeDB:Q9M1J3
PIR:T47767PROSITE:PS51354Proteomes:UP000006548RefSeq:NP_567043.2
SMR:Q9M1J3SUPFAM:SSF52833TAIR:AT3G57070UniGene:At.21474
UniProt:Q9M1J3
Coordinates (TAIR10) chr3:+:21124174..21125427
Molecular Weight (calculated) 45720.80 Da
IEP (calculated) 6.50
GRAVY (calculated) -0.50
Length 417 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSSASKTAS SVSSASSSSA FSPPPTKFSS DSSSPAVQRA FSFPTPLVHH PPARKGDSHH LVSLTSTSYG SLLLLDLDGS KNSSSDQQTL PRISISGKNT
101: PDPVSPDSVI NTWELMDGLD DEFEFEIPKP GKRLNSDFCS KPDPNRNVSL NGSSLKLDES YEIVRIEEDD GDWVPLTYKP KQPLWKHLSE ESFLSDLDPS
201: IVSSYKKALS SKLLSNHSNT RNPHRPTKSL SCSPSSNPSI LISEEPKSVS SSQLISSPAK PRLPGTEDKI VLYFTTLRGI RKTYEDCCCV RAILRGVQVS
301: VDERDISMDS KYRKELQSVL GAAEKPVCLP QVFIRGTHIG GVEEIMQLND GGELAEMLKD FPACERLGTC RSCGDARFVP CTNCDGSTKV FEEQDERFKR
401: CPKCNENGLV RCRVCCL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)