AT4G24460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : CRT (chloroquine-resistance transporter)-like transporter 2 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes one of the CRT-Like transporters (CLT1/AT5G19380, CLT2/AT4G24460, CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive, glutathione(GSH)-deficient, and hypersensitive to Phytophthora infection. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
CRT (chloroquine-resistance transporter)-like transporter 2 (CLT2); INVOLVED IN: response to cadmium ion, defense response to oomycetes, glutathione transport; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chloroquine resistance transporter related (InterPro:IPR013936); BEST Arabidopsis thaliana protein match is: CRT (chloroquine-resistance transporter)-like transporter 3 (TAIR:AT5G12170.2); Has 203 Blast hits to 201 proteins in 65 species: Archae - 2; Bacteria - 34; Metazoa - 4; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12642888..12645310 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46687.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.35 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.65 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 431 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDTVLMATTP PIRCLHASIP TVFRSPAIYQ VSCRSSQLFS YRSTTMMSMC FLRRSDLRSR FLSTPKTTSP MRRPRFSVGA STEESSIPSN RNLIVANSVV 101: IVALAVANRV LYKLALVPMK QYPFFMAQLT TFGYVLIYFT ILYTRRRLGI VTNEMMDVPK WRFAIIGFLE ALGVATGMAA AAMLPGPVIP ILNQTYLVWQ 201: LLFALLILGR RFLLNQIAGC LLVAVGVVVA VSSGSGADTT LSGIGFLWPA VLVASAAFQA GASIIKEFVF NDAAKRLEGK SLDIFVVNSF GSGFQALFVF 301: LLLPFLSNLK GIPFASLPSY LKDGAGCFFN TGAKISGCDG APILPLLYIS TNLAFNISLL HLVKISSAIV SSLTMMLSVP LAVYIMSKPL PYLPGGSSLS 401: SNFTMGCIVL VLGLLLYNIP TTPTKQHTKT S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)