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AT3G47220.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.976
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : phosphatidylinositol-speciwc phospholipase C9
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphatidylinositol-speciwc phospholipase C9 (PLC9); FUNCTIONS IN: phosphoinositide phospholipase C activity, phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-speciwc phospholipase C8 (TAIR:AT3G47290.1); Has 2576 Blast hits to 1856 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 1868; Fungi - 226; Plants - 282; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G47220-MONOMERBioGrid:9195BRENDA:3.1.4.11EC:3.1.4.11
eggNOG:ENOG410XPSWeggNOG:KOG0169EMBL:AK226689EMBL:AL133292
EMBL:BT011755EMBL:CP002686EnsemblPlants:AT3G47220EnsemblPlants:AT3G47220.1
entrez:823875Gene3D:2.60.40.150Gene3D:3.20.20.190GeneID:823875
Genevisible:Q6NMA7GO:GO:0004435GO:GO:0004871GO:GO:0005622
GO:GO:0005886GO:GO:0010286GO:GO:0016042GO:GO:0035556
GO:GO:0055074Gramene:AT3G47220.1gramene_pathway:3.1.4.11gramene_pathway:LIPASYN-PWY
hmmpanther:PTHR10336hmmpanther:PTHR10336:SF92HOGENOM:HOG000244119InParanoid:Q6NMA7
InterPro:IPR000008InterPro:IPR000909InterPro:IPR001192InterPro:IPR001711
InterPro:IPR017946KEGG:00562+3.1.4.11KEGG:04070+3.1.4.11KEGG:ath:AT3G47220
PANTHER:PTHR10336PaxDb:Q6NMA7Pfam:PF00168Pfam:PF00387
Pfam:PF00388Pfam:Q6NMA7Pfscan:PS50004Pfscan:PS50007
Pfscan:PS50008PhylomeDB:Q6NMA7PIR:T45658PRIDE:Q6NMA7
PRINTS:PR00390PRO:PR:Q6NMA7PROSITE:PS50004PROSITE:PS50007
PROSITE:PS50008ProteinModelPortal:Q6NMA7Proteomes:UP000006548Reactome:R-ATH-114604
Reactome:R-ATH-1855204Reactome:R-ATH-202433Reactome:R-ATH-399997Reactome:R-ATH-416476
Reactome:R-ATH-434316Reactome:R-ATH-5607764RefSeq:NP_190306.2SMART:SM00148
SMART:SM00149SMART:SM00239SMR:Q6NMA7STRING:3702.AT3G47220.1
SUPFAM:SSF49562SUPFAM:SSF51695TAIR:AT3G47220tair10-symbols:ATPLC9
tair10-symbols:PLC9UniGene:At.66519UniProt:Q6NMA7
Coordinates (TAIR10) chr3:+:17388119..17390443
Molecular Weight (calculated) 61168.60 Da
IEP (calculated) 8.24
GRAVY (calculated) -0.48
Length 531 amino acids
Sequence (TAIR10)
(BLAST)
001: MVNLRKKFEM KQANQPGRVP NYFRNKYHGY DDDMPNLLPT FIKLLDTEKD EDGAGLNAAE QIDRELKSRK CDILKFRNLT ILELPHLNEF LFSTELNPPI
101: SDQVRHRDMN APLSHYFIHT SLKSYFTGNN VFGRLYSIEP IIDALKQGVR VVELDLLPFG KDGICVRPKW NFEKPLELQE CLDAIKQHAF TPTRSYPVII
201: TIKDSLKPDL QSKVTQMIDQ TFGDMVYHED PQQSLEEFPS PAELQNKILI SRRPPTKLLY AKAVENGVEL EIQEGSTDKN YQSVVGFHAV EPRGMLQKAL
301: TDDVQQPGWY ERDVISFTQN KFLRTRPKKR NLLSNPPYKP QRAWMHGAQM IALSRQDDKE KLWLMQGMFR ANGGCGYVKK PNFLLNAGSS GVFYPTENPV
401: VVKTLKVKIY MGDGWIVDFK KRIGRLSKPD LYVRISIAGV PHDEKIMNTT VKNNEWKPTW GEEFTFPLTY PDLALISFEV YDYEVSTPDY FCGQTCLPVS
501: ELIEGIRAVP LYDERGKACS STMLLTRFKW S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)