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AT3G32030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Terpenoid cyclases/Protein prenyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 1693 Blast hits to 1663 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1687; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G32030-MONOMEREC:4.2.3.-eggNOG:ENOG410IVC5eggNOG:ENOG410YBXH
EMBL:AP002068EMBL:CP002686EnsemblPlants:AT3G32030EnsemblPlants:AT3G32030.1
entrez:822955Gene3D:1.10.600.10Gene3D:1.50.30.10GeneID:822955
Genevisible:Q9LH31GO:GO:0000287GO:GO:0005737GO:GO:0010333
GO:GO:0016114Gramene:AT3G32030.1hmmpanther:PTHR31045hmmpanther:PTHR31045:SF4
HOGENOM:HOG000232971InParanoid:Q9LH31InterPro:IPR001906InterPro:IPR005630
InterPro:IPR008930InterPro:IPR008949KEGG:ath:AT3G32030OMA:HNMEILV
PaxDb:Q9LH31Pfam:PF01397Pfam:PF03936Pfam:Q9LH31
PhylomeDB:Q9LH31PRIDE:Q9LH31PRO:PR:Q9LH31ProteinModelPortal:Q9LH31
Proteomes:UP000006548RefSeq:NP_189746.1SMR:Q9LH31SUPFAM:SSF48239
SUPFAM:SSF48576TAIR:AT3G32030UniGene:At.50239UniPathway:UPA00213
UniProt:Q9LH31
Coordinates (TAIR10) chr3:-:13032458..13035348
Molecular Weight (calculated) 69815.80 Da
IEP (calculated) 5.01
GRAVY (calculated) -0.21
Length 604 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVARTVFGL GTLSYLHQAP LFLKTSQSLF PRPSLSLKPM KHDFVCVKAT TKSSTSDDLE SGRPSILFSP SIWGDYFLSV SVDDSEFDDI AREIESVMKP
101: YVRDRLISSH NSNKDKIRLI HLLISLGISY YFESEIEMIL NKAFEELDMI IAEEDDLETI SIMFEVFRLY QHKMSCDSFV RFKGEDGRLK ESLVGDVRGM
201: LQLYQAAHLG TPSDQYIMEE AKSFTRNHLE SLVESTTIPP HFSSHIRDAL YIDRYHNMEI LVARKYISFY EQEEGHDLTL LKFGKLSFNY CRLHYIQELK
301: TLTKWWKDQD IPSNLPCVRD RIVETYFPTL GLYFEPRFSL GRIIIAKMTI IVVALNDVCD SYATYPEAKS LIDSLQRWDI EAIDELPNYS RIVLRLILET
401: IGEIEREMKP RGRSASVQHT IDETKSLGRA YLALSKWASE GYMPTFDEYM EVGEVTGGMD DFALYSFIAM EDCDEKPLYE WFDSKPKILQ ALSVLYRINN
501: DIVTYEREMS KGEVVNGVNS YMNQHGVTKE EAVEELRKMA RDNYKIVMEE LLTITDVPRP VLVRCLNLAR LFDVFCKHGN DEFTYPHGNL KDLITSIFIH
601: PIPV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)