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AT5G48010.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.941
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : thalianol synthase 1
Curator
Summary (TAIR10)
Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism.
Computational
Description (TAIR10)
thalianol synthase 1 (THAS1); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: baruol synthase 1 (TAIR:AT4G15370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT5G48010EnsemblPlants:AT5G48010.1entrez:834852gramene_pathway:5.4.99.-
gramene_pathway:PWY-5992hmmpanther:PTHR11764hmmpanther:PTHR11764:SF16Pfam:PF13243
Pfam:PF13249scanprosite:PS01074tair10-symbols:THAStair10-symbols:THAS1
TIGRfam:TIGR01787
Coordinates (TAIR10) chr5:+:19457001..19461538
Molecular Weight (calculated) 87257.50 Da
IEP (calculated) 7.03
GRAVY (calculated) -0.34
Length 758 amino acids
Sequence (TAIR10)
(BLAST)
001: MWRLRTGPKA GEDTHLFTTN NYAGRQIWEF DANAGSPQEI AEVEDARHKF SDNTSRFKTT ADLLWRMQFL REKKFEQKIP RVIIEDARKI KYEDAKTALK
101: RGLLYFTALQ ADDGHWPAEN SGPNFYTPPF LICLYITGHL EKIFTPEHVK ELLRHIYNMQ NEDGGWGLHV ESHSVMFCTV INYVCLRIVG EEVGHDDQRN
201: GCAKAHKWIM DHGGATYTPL IGKALLSVLG VYDWSGCNPI PPEFWLLPSS FPVNGGTLWI YLRDTFMGLS YLYGKKFVAP PTPLILQLRE ELYPEPYAKI
301: NWTQTRNRCG KEDLYYPRSF LQDLFWKSVH MFSESILDRW PLNKLIRQRA LQSTMALIHY HDESTRYITG GCLPKAFHML ACWIEDPKSD YFKKHLARVR
401: EYIWIGEDGL KIQSFGSQLW DTALSLHALL DGIDDHDVDD EIKTTLVKGY DYLKKSQITE NPRGDHFKMF RHKTKGGWTF SDQDQGWPVS DCTAESLECC
501: LFFESMPSEL IGKKMDVEKL YDAVDYLLYL QSDNGGIAAW QPVEGKAWLE LLNIMIFRYV ECTGSAIAAL TQFNKQFPGY KNVEVKRFIT KAAKYIEDMQ
601: TVDGSWYGNW GVCFIYGTFF AVRGLVAAGK TYSNCEAIRK AVRFLLDTQN PEGGWGESFL SCPSKKYTPL KGNSTNVVQT AQALMVLIMG DQMERDPLPV
701: HRAAQVLINS QLDNGDFPQQ EIMGTFMRTV MLHFPTYRNT FSLWALTHYT HALRRLLP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)