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AT1G66800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.852
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity, cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, hypocotyl, root, pollen tube; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1); Has 12055 Blast hits to 12042 proteins in 2029 species: Archae - 224; Bacteria - 5367; Metazoa - 406; Fungi - 979; Plants - 2431; Viruses - 61; Other Eukaryotes - 2587 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0451eggNOG:KOG1502EMBL:CP002684EnsemblPlants:AT1G66800
EnsemblPlants:AT1G66800.1entrez:842998Gene3D:3.40.50.720GeneID:842998
GO:GO:0004022GO:GO:0050662GO:GO:0055114Gramene:AT1G66800.1
hmmpanther:PTHR10366hmmpanther:PTHR10366:SF362InParanoid:F4HQ07InterPro:IPR001509
InterPro:IPR016040KEGG:ath:AT1G66800OMA:MHECITAPaxDb:F4HQ07
Pfam:PF01370PRIDE:F4HQ07ProteinModelPortal:F4HQ07Proteomes:UP000006548
RefSeq:NP_176852.2SMR:F4HQ07STRING:3702.AT1G66800.1SUPFAM:SSF51735
TAIR:AT1G66800UniGene:At.18879UniGene:At.65499UniProt:F4HQ07
Coordinates (TAIR10) chr1:+:24924854..24926238
Molecular Weight (calculated) 35196.50 Da
IEP (calculated) 5.09
GRAVY (calculated) 0.01
Length 319 amino acids
Sequence (TAIR10)
(BLAST)
001: MNGEGKVVCV TGASGYIASW IVKLLLLRGY TVRATVRNPM DTKKTNHLLT LEGASERLKL FKSDLLEEGS FDQAIEGCDG VFHTASPVSL TVTDPQTEMI
101: DPAVNGTLNV LRTCAKVSSV KRVIVTSSTA ATLSINPNDV VDETVFTDLS VYLAMKAWYG YSKTLAEETA WRFAKENGID LVVMNPGNVI GPVLQPTLNY
201: SVEVIVDLIN GKNPSNSFYY RFMDVRDVSL AHIKAFEVPS ASGRYILADP DVTMKDIQKL LHELFPDLCR VDKDNENEVG EMAYKVCVDK LKSLGIEFTP
301: IKESLKDTVV SLKERCLLI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)