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AT3G07270.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.752
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : GTP cyclohydrolase I
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GTP cyclohydrolase I; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase I/Nitrile oxidoreductase (InterPro:IPR020602); Has 13749 Blast hits to 7133 proteins in 2143 species: Archae - 132; Bacteria - 8697; Metazoa - 425; Fungi - 313; Plants - 76; Viruses - 16; Other Eukaryotes - 4090 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G07270-MONOMERBioGrid:5250BRENDA:3.5.4.16EC:3.5.4.16
eggNOG:COG0302eggNOG:KOG2698EMBL:AC012395EMBL:AF489530
EMBL:AY099882EMBL:BT006600EMBL:CP002686EnsemblPlants:AT3G07270
EnsemblPlants:AT3G07270.1entrez:819915ExpressionAtlas:Q9SFV7GeneID:819915
Genevisible:Q9SFV7GO:GO:0003934GO:GO:0005525GO:GO:0005737
GO:GO:0006729GO:GO:0035998GO:GO:0046654GO:GO:0046872
hmmpanther:PTHR11109hmmpanther:PTHR11109:SF0HOGENOM:HOG000241104IntAct:Q9SFV7
InterPro:IPR001474InterPro:IPR020602KEGG:00790+3.5.4.16KEGG:ath:AT3G07270
KO:K01495PANTHER:PTHR11109PaxDb:Q9SFV7Pfam:PF01227
Pfam:Q9SFV7PhylomeDB:Q9SFV7PRIDE:Q9SFV7PRO:PR:Q9SFV7
ProteinModelPortal:Q9SFV7Proteomes:UP000006548Reactome:R-ATH-1474151RefSeq:NP_187383.1
SMR:Q9SFV7STRING:3702.AT3G07270.1SUPFAM:SSF55620TAIR:AT3G07270
UniGene:At.50597UniPathway:UPA00848UniProt:Q9SFV7
Coordinates (TAIR10) chr3:+:2315451..2317059
Molecular Weight (calculated) 51383.10 Da
IEP (calculated) 7.36
GRAVY (calculated) -0.08
Length 466 amino acids
Sequence (TAIR10)
(BLAST)
001: MGALDEGCLN LELDIGMKNG CIELAFEHQP ETLAIQDAVK LLLQGLHEDV NREGIKKTPF RVAKALREGT RGYKQKVKDY VQSALFPEAG LDEGVGQAGG
101: VGGLVVVRDL DHYSYCESCL LPFHVKCHIG YVPSGQRVLG LSKFSRVTDV FAKRLQDPQR LADDICSALQ HWVKPAGVAV VLECSHIHFP SLDLDSLNLS
201: SHRGFVKLLV SSGSGVFEDE SSNLWGEFQS FLMFKGVKTQ ALCRNGSSVK EWCPSVKSSS KLSPEVDPEM VSAVVSILKS LGEDPLRKEL IATPTRFLKW
301: MLNFQRTNLE MKLNSFNPAK VNGEVKEKRL HCELNMPFWS MCEHHLLPFY GVVHIGYFCA EGSNPNPVGS SLMKAIVHFY GFKLQVQERM TRQIAETLSP
401: LVGGDVIVVA EAGHTCMISR GIEKFGSSTA TIAVLGRFSS DNSARAMFLD KIHTTNALKT ESSSPF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)