suba logo
AT1G10430.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:30447334 (2019): plasma membrane
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : protein phosphatase 2A-2
Curator
Summary (TAIR10)
Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].
Computational
Description (TAIR10)
protein phosphatase 2A-2 (PP2A-2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G59830.1); Has 6751 Blast hits to 6569 proteins in 471 species: Archae - 80; Bacteria - 183; Metazoa - 2378; Fungi - 1410; Plants - 970; Viruses - 5; Other Eukaryotes - 1725 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G10430-MONOMERBioGrid:22823EC:3.1.3.16eggNOG:COG0639
eggNOG:KOG0371EMBL:AC007067EMBL:AY059847EMBL:AY093267
EMBL:CP002684EMBL:M96733EnsemblPlants:AT1G10430EnsemblPlants:AT1G10430.1
entrez:837583Gene3D:3.60.21.10GeneID:837583Genevisible:Q07098
GO:GO:0004721GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0005886GO:GO:0006470GO:GO:0009903GO:GO:0034613
GO:GO:0046872Gramene:AT1G10430.1HOGENOM:HOG000172696InParanoid:Q07098
IntAct:Q07098InterPro:IPR004843InterPro:IPR006186InterPro:IPR029052
KEGG:ath:AT1G10430KO:K04382OMA:KEVDQWIPaxDb:Q07098
Pfam:PF00149Pfam:Q07098PhylomeDB:Q07098PIR:S31162
PRIDE:Q07098PRINTS:PR00114PRO:PR:Q07098PROSITE:PS00125
ProteinModelPortal:Q07098Proteomes:UP000006548Reactome:R-ATH-113501Reactome:R-ATH-198753
Reactome:R-ATH-202670Reactome:R-ATH-69231Reactome:R-ATH-975957RefSeq:NP_172514.1
scanprosite:PS00125SMART:SM00156SMR:Q07098STRING:3702.AT1G10430.1
SUPFAM:SSF56300TAIR:AT1G10430tair10-symbols:PP2A-2UniGene:At.21842
UniProt:Q07098
Coordinates (TAIR10) chr1:-:3428705..3430437
Molecular Weight (calculated) 34936.30 Da
IEP (calculated) 4.49
GRAVY (calculated) -0.32
Length 306 amino acids
Sequence (TAIR10)
(BLAST)
001: MPSNGDLDRQ IEQLMECKPL SEADVRTLCD QARAILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)