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AT5G46800.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:24727099 (2014): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23444301 (2013): mitochondrion
  • PMID:22923678 (2012): mitochondrion
  • PMID:22574745 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:21311031 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid
  • PMID:16618929 (2006): unclear
  • PMID:15276431 (2004): mitochondrion
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial substrate carrier family protein
Curator
Summary (TAIR10)
Seedling lethal mutation; Mitochondrial Carnitine Acyl Carrier-Like Protein
Computational
Description (TAIR10)
A BOUT DE SOUFFLE (BOU); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, ornithine transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G33820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:19972eggNOG:ENOG410XS86eggNOG:KOG0758EMBL:AB016882
EMBL:AJ277732EMBL:AY136374EMBL:BT000165EMBL:CP002688
EnsemblPlants:AT5G46800EnsemblPlants:AT5G46800.1entrez:834724Gene3D:1.50.40.10
GeneID:834724Genevisible:Q93XM7GO:GO:0003735GO:GO:0005739
GO:GO:0005743GO:GO:0006412GO:GO:0006839GO:GO:0009507
GO:GO:0009536GO:GO:0016021Gramene:AT5G46800.1hmmpanther:PTHR24089
hmmpanther:PTHR24089:SF341HOGENOM:HOG000168307InParanoid:Q93XM7InterPro:IPR018108
InterPro:IPR023395KEGG:ath:AT5G46800KO:K15109OMA:FPRYSGA
PaxDb:Q93XM7Pfam:PF00153Pfam:Q93XM7Pfscan:PS50920
PhylomeDB:Q93XM7PRIDE:Q93XM7PRO:PR:Q93XM7PROSITE:PS50920
ProteinModelPortal:Q93XM7Proteomes:UP000006548Reactome:R-ATH-200425RefSeq:NP_568670.1
SMR:Q93XM7STRING:3702.AT5G46800.1SUPFAM:0048588SUPFAM:SSF103506
TAIR:AT5G46800tair10-symbols:BOUUniGene:At.23694UniGene:At.74120
UniProt:Q93XM7
Coordinates (TAIR10) chr5:-:18988779..18989810
Molecular Weight (calculated) 31024.50 Da
IEP (calculated) 9.99
GRAVY (calculated) 0.17
Length 300 amino acids
Sequence (TAIR10)
(BLAST)
001: MADAWKDLAS GTVGGAAQLV VGHPFDTIKV KLQSQPTPAP GQLPRYTGAI DAVKQTVASE GTKGLYKGMG APLATVAAFN AVLFTVRGQM EGLLRSEAGV
101: PLTISQQFVA GAGAGFAVSF LACPTELIKC RLQAQGALAG ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREVPGNAT MFAAYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPTDVVKSV LQVDDYKNPR YTGSMDAFRK ILKSEGVKGL YKGFGPAMAR SVPANAACFL AYEMTRSSLG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)