AT4G26860.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Predicted pyridoxal phosphate-dependent enzyme, YBL036C type | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Predicted pyridoxal phosphate-dependent enzyme, YBL036C type; CONTAINS InterPro DOMAIN/s: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type (InterPro:IPR011078), Alanine racemase, N-terminal (InterPro:IPR001608); BEST Arabidopsis thaliana protein match is: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type (TAIR:AT1G11930.2); Has 7173 Blast hits to 7173 proteins in 2384 species: Archae - 21; Bacteria - 4279; Metazoa - 130; Fungi - 133; Plants - 56; Viruses - 0; Other Eukaryotes - 2554 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:13503291..13504693 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26640.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.02 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||
| Length | 244 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAPAVEATV ASALRSVILR ARKAAEQVGR DPERVRVLPV SKTKPVSLIR QIYDAGHRCF GENYVQEIID KAPQLPEDIE WHFVGHLQSN KAKTLLTGVP 101: NLAMVHGVDG EKVANHLDRA VSNLGRHPLK VLVQVNTSGE VSKSGIEPSS VVELARHVKH HCPNLVFSGL MTIGMPDYTS TPENFRTLSN CRADVCKALG 201: MAEDQFELSM GMSGDFELAI EMGSTNVRVG STIFGPREYP KKTT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)