AT1G29700.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Metallo-hydrolase/oxidoreductase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Metallo-hydrolase/oxidoreductase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 404 Blast hits to 404 proteins in 124 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 2; Plants - 43; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:10385196..10386906 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38153.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.06 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.07 | ||||||||||||||||||||||||||||||||
| Length | 350 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MALVVSGGKA AMMPLHANSL PLSINTKSRV LSASAFPLFS STPHLPSRSL SIRLSPNVSR SLTVVSSVLS EDRATNVSGS GTDAFKLTYL EGNSWLWETA 101: GLKILVDPIL VGNLDFGIPW LYDAAKRYLK AFKLDDLPEV DCLLITQSLD DHCHLNTLRP LSEKSPGIKV IATPNAKPLL DPLFSNVTYL EPGDSFELNA 201: RNGSKVRVKA TAGPVLGPPW QRPENGYLLV SPEDQISLYY EPHCVCNMEL LKNERADIVI TPVIKQLLPR FTLVSGQEDA VQLAKLLKAK FVVPMQNGEL 301: EAKGLLASLV KKEGTIESFK ELLLKELPEA QVLEPIAGIP LEILVPSSDI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)