AT1G59520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.696 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : CW7 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes CW7. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
CW7; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2045 (InterPro:IPR019141); Has 144 Blast hits to 143 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 90; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:21861589..21866016 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42991.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.83 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||
| Length | 388 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLNDGEVTPS RHEILSMVKK HSKSLGKTSL DEQDASDVEM DSNFWHGVFD VYFVRCMESR RRQDDDLLFF VRKLSCKSYG LTENEDAPAP YFVRRWAPKL 101: DELLGESLAE VDWRKSFYLN MIAHTSFTVT VAICSNEALK TYQGSKDTKL SPIYKVVKTV YASPSRVNFH LDSKKEVETT PAYPEICFAV DDFDSTFDAV 201: VLTDKDHCYC VLLNSHDGAA FPSATVKDSS DSNTNADPRT VKDPKVTLFS GFVSYQMVRE AYEGGRNRFG SLLSLGHITG KADRLYMRGP GGRGEVEVAV 301: SGVVDQSQVV LGPVSPMSSK KSIDLGSIFR KAASVASVAA KHAIAAATAS YDEDEMFPLK CCLMSISLPW DTIAHDLLFK ATPPVNME |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)