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AT2G32960.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Phosphotyrosine protein phosphatases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, catalytic activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT1G05000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G32960-MONOMEReggNOG:COG2365eggNOG:KOG1572EMBL:AK227524
EMBL:BT006379EMBL:CP002685EnsemblPlants:AT2G32960EnsemblPlants:AT2G32960.1
entrez:817858Gene3D:3.90.190.10GeneID:817858GO:GO:0004725
GO:GO:0016791Gramene:AT2G32960.1hmmpanther:PTHR31126hmmpanther:PTHR31126:SF0
HOGENOM:HOG000188365IntAct:Q84MD6InterPro:IPR000387InterPro:IPR004861
InterPro:IPR016130InterPro:IPR020428InterPro:IPR029021KEGG:ath:AT2G32960
OMA:YTNGNSKPfam:PF03162Pfscan:PS50056PhylomeDB:Q84MD6
PRINTS:PR01911PROSITE:PS00383PROSITE:PS50056Proteomes:UP000006548
RefSeq:NP_180855.2scanprosite:PS00383SMR:Q84MD6STRING:3702.AT2G32960.1
SUPFAM:SSF52799TAIR:AT2G32960UniGene:At.37999UniProt:Q84MD6
Coordinates (TAIR10) chr2:+:13987976..13990720
Molecular Weight (calculated) 29160.10 Da
IEP (calculated) 8.07
GRAVY (calculated) -0.39
Length 257 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLIEKTMSM NQFRTMEEEK QDGGELFHTI EVAKVDRNNV SQPPPAATAA LLEVPGDELN LIPPLNFSMV DNGIFRSGFP DSANFSFIKT LGLRSIISLC
101: PEPYPENNMQ FLKSNGISLF QFGIEGSKSK CLPGLENEVW LHIWSSKHQK EDFYTNGNSK TSEPFVDILD QKIREALKVL LDEKNHPLLI HCKRGKHRTG
201: CLVGCMRKLQ KWCITSILDE YKRFAAAKAR VSDQRFLESF DVSGLKHTPM SFSCSNR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)