AT1G49620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cyclin-dependent kinase inhibitor family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Binds to D type cyclins and may inhibit cell cycle. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ICK5; FUNCTIONS IN: cyclin binding, cyclin-dependent protein kinase inhibitor activity; INVOLVED IN: negative regulation of cyclin-dependent protein kinase activity; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); BEST Arabidopsis thaliana protein match is: KIP-related protein 6 (TAIR:AT3G19150.1); Has 254 Blast hits to 244 proteins in 41 species: Archae - 0; Bacteria - 7; Metazoa - 4; Fungi - 18; Plants - 204; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:18365692..18366559 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 21965.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.38 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.00 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 195 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSETKPKRDS EYEGSNIKRM RLDDDDDVLR SPTRTLSSSS SSSLAYSVSD SGGFCSVALS EEEDDHLSSS ISSGCSSSET NEIATRLPFS DLEAHEISET 101: EISTLLTNNF RKQGISSSEN LGETAEMDSA TTEMRDQRKT EKKKKMEKSP TQAELDDFFS AAERYEQKRF TEKYNYDIVN DTPLEGRYQW VSLKP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)