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AT5G67350.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2VCeggNOG:ENOG410Z31JEMBL:AB007645EMBL:BT020403
EMBL:BT021086EMBL:CP002688EnsemblPlants:AT5G67350EnsemblPlants:AT5G67350.1
entrez:836870GeneID:836870Gramene:AT5G67350.1hmmpanther:PTHR33922
hmmpanther:PTHR33922:SF2KEGG:ath:AT5G67350OMA:TRESEEIPhylomeDB:Q9FN16
Proteomes:UP000006548RefSeq:NP_201536.1TAIR:AT5G67350UniGene:At.28814
UniProt:Q9FN16
Coordinates (TAIR10) chr5:-:26868521..26869429
Molecular Weight (calculated) 34142.00 Da
IEP (calculated) 6.78
GRAVY (calculated) -0.80
Length 302 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMTCTEDDD KTLLISHRYQ EDDDDVEEEE EEEALSLCDL PNEKGELRSI VKEEDEEFDS GFEFGIGSSF RAGSDSCEPA PEMSTADELF FKGRILPLRH
101: SVSLDAGLNE PTRLITRSES VEFRRTGIIR SDRKIKNNFI DYSQPSPQPQ IRRSSSMTAR VNSIRNPKSS SIWDFLRLGL VRTPEIELRT TAGNAKLSVS
201: RNSSCSSTST SSNSKKIGSG ESRSRNRRRS FMFSDCKCSV STETKMAPVK IKVSSGETEE KQRMMEKKTA KKEEKSAMAR KRTFEWLSQV GFVVDHGRRT
301: LV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)