AT2G16900.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Arabidopsis phospholipase-like protein (PEARLI 4) family | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Arabidopsis phospholipase-like protein (PEARLI 4) family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT4G35110.2); Has 457 Blast hits to 353 proteins in 76 species: Archae - 10; Bacteria - 16; Metazoa - 75; Fungi - 22; Plants - 192; Viruses - 47; Other Eukaryotes - 95 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:7323857..7325374 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42529.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.28 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.80 | ||||||||||||||||||||||||||||||||
| Length | 382 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDVNRKAHPD CRYSSNPFHE CASDCLEKIS QGRGNKNSKK QGSKILSLPG SFGKKKTESQ PPSPLSTRNY QNGAANTPKV RQSRPSPVAM KKTPVPEANK 101: SLHSLSSDGI SIDLNGQNDS FNHKQEKPSR TVPLSPNSMA DRGKPLSPRP QGHEHSGKND TASEISLFNV VSPPRSCAND DDDDDDENNG YEEGVELDLI 201: SVMSDSCVSV GKYRVNSSVS TILQSIIDKH GDIAANCKLE SASMRSRYLE CLCSLMQELG STPVGQLTEL KVKEMVAVLK DLESVNIDVG WMRSVLEEFA 301: QYQENTDSEK ERQEGLVRSK KQEMEIQEAD LARIEKEVAE ARLRVEEMKA ELAELETERL RMEEMGFKVE KYKGKTFLDE LL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)