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AT1G08940.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHHUeggNOG:ENOG4111HP2EMBL:AC000106EMBL:CP002684
EnsemblPlants:AT1G08940EnsemblPlants:AT1G08940.1entrez:837415Gene3D:3.40.50.1240
GeneID:837415Genevisible:O04035GO:GO:0003824Gramene:AT1G08940.1
hmmpanther:PTHR23029hmmpanther:PTHR23029:SF18HOGENOM:HOG000221683InParanoid:O04035
InterPro:IPR001345InterPro:IPR013078InterPro:IPR029033KEGG:ath:AT1G08940
OMA:RLFCMRWPaxDb:O04035Pfam:O04035Pfam:PF00300
PhylomeDB:O04035PIR:C86221PRIDE:O04035PRO:PR:O04035
PROSITE:PS00175ProteinModelPortal:O04035Proteomes:UP000006548RefSeq:NP_172369.1
scanprosite:PS00175SMART:SM00855SMR:O04035STRING:3702.AT1G08940.1
SUPFAM:SSF53254TAIR:AT1G08940UniGene:At.43619UniProt:O04035
Coordinates (TAIR10) chr1:+:2877694..2879104
Molecular Weight (calculated) 32680.50 Da
IEP (calculated) 5.50
GRAVY (calculated) -0.67
Length 281 amino acids
Sequence (TAIR10)
(BLAST)
001: MVNEKKMLPK RIILMRHGES AGNIDAGAYA TTPDHKIPLT EEGRAQAREA GKKMRALIST QSGGACGENW RVYFYVSPYE RTRTTLREVG KGFSRKRVIG
101: VREECRIREQ DFGNFQVEER MRVVKETRER FGRFFYRFPE GESAADVYDR VSSFLESMWR DVDMNRHQVD PSSELNLVIV SHGLTSRVFL TKWFKWTVAE
201: FERLNNFGNC EFRVMELGAS GEYTFAIHHS EEEMLDWGMS KDMIDDQKDR VDGCRVTTSN DSCSLHLNEY FDLLDVTDDE E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)