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AT3G54150.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G55450.1); Has 989 Blast hits to 984 proteins in 381 species: Archae - 6; Bacteria - 545; Metazoa - 68; Fungi - 151; Plants - 164; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111IQHeggNOG:KOG3010EMBL:AK175534EMBL:AL132957
EMBL:AY064066EMBL:AY096375EMBL:CP002686EnsemblPlants:AT3G54150
EnsemblPlants:AT3G54150.1entrez:824582Gene3D:3.40.50.150GeneID:824582
GO:GO:0005634GO:GO:0005829GO:GO:0008757GO:GO:0009846
GO:GO:0010584GO:GO:0032259Gramene:AT3G54150.1hmmpanther:PTHR10108
hmmpanther:PTHR10108:SF725InterPro:IPR013216InterPro:IPR029063KEGG:ath:AT3G54150
OMA:WDAGCGSPfam:PF08241PhylomeDB:Q9M389PIR:T47574
Proteomes:UP000006548RefSeq:NP_190983.1SMR:Q9M389STRING:3702.AT3G54150.1
SUPFAM:SSF53335TAIR:AT3G54150UniGene:At.27081UniProt:Q9M389
Coordinates (TAIR10) chr3:-:20050802..20052742
Molecular Weight (calculated) 36646.60 Da
IEP (calculated) 6.02
GRAVY (calculated) -0.44
Length 323 amino acids
Sequence (TAIR10)
(BLAST)
001: MAALSEKEAE AYLDARPRYP IDWFKKIAAR TQDHKFAWDV GTGNGQAAIG LVEHYENVVA TDINEAQLQR AIKHSRISYH HTPTTISEDE MVDLLGGENS
101: VDLIVAAQAV HFFDLNVFYN VAKRVLRKEG GLIAVWVYND IIISHEIDPI MKRLVDSTLP FRTPIMNLAF DGYKTLTFPF ETIGMGSEGK PITLDIPHKL
201: SLKGFIGFLR SWQPAMKAKE KGVELINEDL ITKFEEAWGD ETQVKDVFYK AHMIVGKIPE EKFESDQVLS NKGRLLLETE VGRNQKRPQP SDEGDRQSKK
301: QNTSEDDACK DKPSSVFSTH YRF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)