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AT2G26560.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : phospholipase A 2A
Curator
Summary (TAIR10)
Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.
Computational
Description (TAIR10)
phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G26560-MONOMERBioGrid:2549DNASU:817197EC:3.1.1.-
eggNOG:COG3621eggNOG:KOG0513EMBL:AC002505EMBL:AY062644
EMBL:AY085946EMBL:AY093305EMBL:CP002685EnsemblPlants:AT2G26560
EnsemblPlants:AT2G26560.1entrez:817197GeneID:817197Genevisible:O48723
GO:GO:0004620GO:GO:0005737GO:GO:0006629GO:GO:0009626
GO:GO:0016020GO:GO:0016042GO:GO:0016298GO:GO:0031408
GO:GO:0046686GO:GO:0047372GO:GO:0051607GO:GO:0071456
Gramene:AT2G26560.1hmmpanther:PTHR32176HOGENOM:HOG000189358InParanoid:O48723
IntAct:O48723InterPro:IPR002641InterPro:IPR016035KEGG:ath:AT2G26560
OMA:NENAYETPaxDb:O48723Pfam:O48723Pfam:PF01734
PhylomeDB:O48723PIR:T00989PRIDE:O48723PRO:PR:O48723
ProteinModelPortal:O48723Proteomes:UP000006548RefSeq:NP_180224.1SMR:O48723
STRING:3702.AT2G26560.1SUPFAM:SSF52151TAIR:AT2G26560tair10-symbols:PLA IIA
tair10-symbols:PLA2Atair10-symbols:PLP2UniGene:At.12388UniProt:O48723
Coordinates (TAIR10) chr2:-:11293912..11295708
Molecular Weight (calculated) 44241.70 Da
IEP (calculated) 5.76
GRAVY (calculated) -0.16
Length 407 amino acids
Sequence (TAIR10)
(BLAST)
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)