AT5G57220.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cytochrome P450, family 81, subfamily F, polypeptide 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
member of CYP81F, involved in glucosinolate metabolism. Mutants had impaired resistance to fungi. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cytochrome P450, family 81, subfamily F, polypeptide 2 (CYP81F2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily F, polypeptide 3 (TAIR:AT4G37400.1); Has 35927 Blast hits to 35660 proteins in 1834 species: Archae - 77; Bacteria - 5490; Metazoa - 12066; Fungi - 7231; Plants - 9556; Viruses - 3; Other Eukaryotes - 1504 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:+:23187911..23189681 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 55696.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.69 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 491 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDYVLIVLPL ALFLIAYKFL FSSKTQGFNL PPGPTPFPIV GHLHLVKPPV HRLFRRFAEK YGDIFSLRYG SRQVVVISSL PLVRESFTGQ NDVILTNRPH 101: FLTAKYVAYD YTTIGTAAYG DHWRNLRRIC SLEILSSNRL TGFLSVRKDE IRRLLTKLSR EYDGRVVELE PLLADLTFNN IVRMVTGRRY YGDQVHNKEE 201: ANLFKKLVTD INDNSGASHP GDYLPILKVF GHGYEKKVKA LGEAMDAFLQ RLLDECRING ESNTMVSHLL SLQLDQPKYY SDVIIKGLML SMMLAGTDTA 301: AVTLEWAMAN LLKKPEVLKK AKAEIDEKIG EERLVDEPDI ANLPYLQNIV SETFRLCPAA PLLVPRSPSE DLKIGGYDIP RGTIVLVNAW AIHRDPRLWD 401: EPEKFMPERF EDQEASKKLM VFGNGRRTCP GATLGQRMVL LALGSLIQCF DWEKVNGEDV DMTENPGMAM RKLVQLRAVC HKRPIMTNLL A |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)