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AT5G57220.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26721862 (2016): endoplasmic reticulum endoplasmic reticulum membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 81, subfamily F, polypeptide 2
Curator
Summary (TAIR10)
member of CYP81F, involved in glucosinolate metabolism. Mutants had impaired resistance to fungi.
Computational
Description (TAIR10)
cytochrome P450, family 81, subfamily F, polypeptide 2 (CYP81F2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily F, polypeptide 3 (TAIR:AT4G37400.1); Has 35927 Blast hits to 35660 proteins in 1834 species: Archae - 77; Bacteria - 5490; Metazoa - 12066; Fungi - 7231; Plants - 9556; Viruses - 3; Other Eukaryotes - 1504 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G57220-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156
EMBL:AB019233EMBL:AY065209EMBL:AY096511EMBL:CP002688
EMBL:FM208179EnsemblPlants:AT5G57220EnsemblPlants:AT5G57220.1entrez:835828
Gene3D:1.10.630.10GeneID:835828GO:GO:0002213GO:GO:0005506
GO:GO:0009617GO:GO:0009682GO:GO:0009759GO:GO:0016020
GO:GO:0016021GO:GO:0016709GO:GO:0019760GO:GO:0020037
GO:GO:0042343GO:GO:0042742GO:GO:0050832GO:GO:0052544
GO:GO:0071456Gramene:AT5G57220.1gramene_pathway:2.1.1.-gramene_pathway:PWY-601
gramene_pathway:PWYQT-4477hmmpanther:PTHR24298hmmpanther:PTHR24298:SF171InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT5G57220KO:K00517
OMA:DQPKYYSPaxDb:Q9LVD6Pfam:PF00067PhylomeDB:Q9LVD6
PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086ProteinModelPortal:Q9LVD6
Proteomes:UP000006548RefSeq:NP_200532.1scanprosite:PS00086SMR:Q9LVD6
STRING:3702.AT5G57220.1SUPFAM:SSF48264TAIR:AT5G57220tair10-symbols:CYP81F2
UniGene:At.28563UniProt:Q9LVD6
Coordinates (TAIR10) chr5:+:23187911..23189681
Molecular Weight (calculated) 55696.00 Da
IEP (calculated) 8.69
GRAVY (calculated) -0.15
Length 491 amino acids
Sequence (TAIR10)
(BLAST)
001: MDYVLIVLPL ALFLIAYKFL FSSKTQGFNL PPGPTPFPIV GHLHLVKPPV HRLFRRFAEK YGDIFSLRYG SRQVVVISSL PLVRESFTGQ NDVILTNRPH
101: FLTAKYVAYD YTTIGTAAYG DHWRNLRRIC SLEILSSNRL TGFLSVRKDE IRRLLTKLSR EYDGRVVELE PLLADLTFNN IVRMVTGRRY YGDQVHNKEE
201: ANLFKKLVTD INDNSGASHP GDYLPILKVF GHGYEKKVKA LGEAMDAFLQ RLLDECRING ESNTMVSHLL SLQLDQPKYY SDVIIKGLML SMMLAGTDTA
301: AVTLEWAMAN LLKKPEVLKK AKAEIDEKIG EERLVDEPDI ANLPYLQNIV SETFRLCPAA PLLVPRSPSE DLKIGGYDIP RGTIVLVNAW AIHRDPRLWD
401: EPEKFMPERF EDQEASKKLM VFGNGRRTCP GATLGQRMVL LALGSLIQCF DWEKVNGEDV DMTENPGMAM RKLVQLRAVC HKRPIMTNLL A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)