AT1G21130.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.669 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : O-methyltransferase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, protein dimerization activity, O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G21100.1); Has 3382 Blast hits to 3377 proteins in 592 species: Archae - 1; Bacteria - 963; Metazoa - 105; Fungi - 662; Plants - 1542; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:7399170..7400470 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 40750.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.77 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 373 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGYLLEETLS SNSKTPIVID DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAEASR SDSFLSPSEI ASKLPTTPRN PEAPVLLDRM LRLLASYSVV 101: KCGKVSEGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA 201: LEVYQGFKGV NVLVDVGGGV GNTLGVVASK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPESG 301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)