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AT4G35620.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Cyclin B2;2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cyclin B2;2 (CYCB2;2); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;1 (TAIR:AT2G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:14996eggNOG:COG5024eggNOG:KOG0653EMBL:AK226721
EMBL:AL031135EMBL:AL161587EMBL:CP002687EMBL:Z31401
EnsemblPlants:AT4G35620EnsemblPlants:AT4G35620.1entrez:829714Gene3D:1.10.472.10
GeneID:829714Genevisible:Q39070GO:GO:0005634GO:GO:0007049
GO:GO:0051301Gramene:AT4G35620.1hmmpanther:PTHR10177hmmpanther:PTHR10177:SF196
HOGENOM:HOG000167672InParanoid:Q39070IntAct:Q39070InterPro:IPR004367
InterPro:IPR006671InterPro:IPR013763KEGG:ath:AT4G35620KO:K05868
OMA:DKFELMNPaxDb:Q39070Pfam:PF00134Pfam:PF02984
Pfam:Q39070PhylomeDB:Q39070PIR:T04667PRIDE:Q39070
PRO:PR:Q39070PROSITE:PS00292ProteinModelPortal:Q39070Proteomes:UP000006548
RefSeq:NP_195287.1scanprosite:PS00292SMART:SM00385SMART:SM01332
SMR:Q39070STRING:3702.AT4G35620.1SUPFAM:SSF47954TAIR:AT4G35620
tair10-symbols:CYCB2;2UniGene:At.26UniProt:Q39070
Coordinates (TAIR10) chr4:+:16901744..16903766
Molecular Weight (calculated) 49789.60 Da
IEP (calculated) 4.83
GRAVY (calculated) -0.42
Length 429 amino acids
Sequence (TAIR10)
(BLAST)
001: MVNPEENNRN LVVKPITEIL QDDDKRSRKF GVEMKRQNRR ALGVINHNLV GAKAYPCVVN KRRGLSQRKQ ESCDKKKLDS LHPSISRSQE ETKKLKPSGN
101: EFGDCIFIDE EEEKNEEVTL DQPMPMSLEE PYIEFDPMEE EVEMEDMEEE QEEPVLDIDE YDANNSLAAV EYVQDLYDFY RKTERFSCVP LDYMAQQFDI
201: SDKMRAILID WLIEVHDKFE LMNETLFLTV NLIDRFLSKQ AVARKKLQLV GLVALLLACK YEEVSVPIVE DLVVISDKAY TRTDVLEMEK IMLSTLQFNM
301: SLPTQYPFLK RFLKAAQSDK KLEILASFLI ELALVDYEMV RYPPSLLAAT AVYTAQCTIH GFSEWNSTCE FHCHYSENQL LECCRRMVRL HQKAGTDKLT
401: GVHRKYSSSK FGYIATKYEA AHFLVSDSH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)