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AT1G69920.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.968
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase TAU 12
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase TAU 12 (GSTU12); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336), Glutathione S-transferase, N-terminal (InterPro:IPR004045); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 13 (TAIR:AT1G27130.1); Has 3943 Blast hits to 3928 proteins in 654 species: Archae - 0; Bacteria - 1408; Metazoa - 251; Fungi - 102; Plants - 1945; Viruses - 0; Other Eukaryotes - 237 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G69920-MONOMEREC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406
EMBL:AC010675EMBL:BT010687EMBL:BT011586EMBL:CP002684
EnsemblPlants:AT1G69920EnsemblPlants:AT1G69920.1entrez:843328Gene3D:1.20.1050.10
Gene3D:3.40.30.10GeneID:843328Genevisible:Q6NMS0GO:GO:0004364
GO:GO:0005634GO:GO:0005737GO:GO:0006749GO:GO:0009407
GO:GO:0009636Gramene:AT1G69920.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF193
HOGENOM:HOG000125749InParanoid:Q6NMS0InterPro:IPR004045InterPro:IPR010987
InterPro:IPR012336KEGG:ath:AT1G69920KO:K00799OMA:VKLIGTW
PaxDb:Q6NMS0Pfam:PF13417Pfam:Q6NMS0Pfscan:PS50404
Pfscan:PS50405PIR:F96721PRO:PR:Q6NMS0PROSITE:PS50404
PROSITE:PS50405ProteinModelPortal:Q6NMS0Proteomes:UP000006548RefSeq:NP_177150.2
SMR:Q6NMS0STRING:3702.AT1G69920.1SUPFAM:SSF47616SUPFAM:SSF52833
TAIR:AT1G69920tair10-symbols:ATGSTU12tair10-symbols:GSTU12UniGene:At.35363
UniProt:Q6NMS0
Coordinates (TAIR10) chr1:-:26334395..26335537
Molecular Weight (calculated) 27924.70 Da
IEP (calculated) 8.98
GRAVY (calculated) -0.10
Length 254 amino acids
Sequence (TAIR10)
(BLAST)
001: MLKNKKSDNS LSRDTLQIKK RKKTTMAQNG SNTTVKLIGT WASPFAIRAQ VALHLKSVEH EYVEETDVLK GKSDLLIKSN PIHKKVPVLI HGDVSICESL
101: NIVQYVDESW PSDLSILPTL PSERAFARFW AHFVDGKLFE SIDAVAGAKD DAARMTLAGN LMENLAALEE AFQKSSKGGD FFGGGNIGFV DITVGAIVGP
201: ISVIEAFSGV KFLRPDTTPG LIQWAEKFRA HEAVKPYMPT VAEFIEFAKK KFSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)