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AT1G14550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21109274 (2011): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peroxidase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G14550-MONOMEREC:1.11.1.7eggNOG:ENOG410IVKBeggNOG:ENOG410ZJEX
EMBL:AC010657EMBL:AC012188EMBL:CP002684EnsemblPlants:AT1G14550
EnsemblPlants:AT1G14550.1entrez:838017GeneID:838017Genevisible:Q9M9Q9
GO:GO:0004601GO:GO:0005576GO:GO:0006979GO:GO:0020037
GO:GO:0046872GO:GO:0071456Gramene:AT1G14550.1hmmpanther:PTHR31388
hmmpanther:PTHR31388:SF37HOGENOM:HOG000237557InParanoid:Q9M9Q9InterPro:IPR000823
InterPro:IPR002016InterPro:IPR010255InterPro:IPR019793InterPro:IPR019794
KEGG:00940+1.11.1.7KEGG:ath:AT1G14550KO:K00430OMA:RDALPNF
PaxDb:Q9M9Q9PeroxiBase:81Pfam:PF00141Pfam:Q9M9Q9
Pfscan:PS50873PhylomeDB:Q9M9Q9PIR:C86280PRIDE:Q9M9Q9
PRINTS:PR00458PRINTS:PR00461PRO:PR:Q9M9Q9PROSITE:PS00435
PROSITE:PS00436PROSITE:PS50873ProteinModelPortal:Q9M9Q9Proteomes:UP000006548
RefSeq:NP_172907.1scanprosite:PS00435scanprosite:PS00436SMR:Q9M9Q9
STRING:3702.AT1G14550.1SUPFAM:SSF48113TAIR:AT1G14550UniGene:At.51610
UniProt:Q9M9Q9
Coordinates (TAIR10) chr1:+:4979028..4980324
Molecular Weight (calculated) 35008.90 Da
IEP (calculated) 8.79
GRAVY (calculated) -0.12
Length 321 amino acids
Sequence (TAIR10)
(BLAST)
001: MERFSLRFVL MMVSIILTSS ICQAQLSPTF YDQSCRNALS KIRSSVRTAI ARERRMAASL IRMHFHDCFV HGCDASILLE GTSTIESERD ALPNFKSVRG
101: FEVIDKAKSE VEKVCPGIVS CADIIAVAAR DASEYVGGPK WAVKVGRRDS TAAFKALANS GELPGFKDTL DQLSGLFSKK GLNTRDLVAL SGAHTIGQSQ
201: CFLFRDRLYE NSSDIDAGFA STRKRRCPTV GGDGNLAALD LVTPNSFDNN YYKNLMQKKG LLVTDQVLFG SGASTDGIVS EYSKNRSKFA ADFATAMIKM
301: GNIEPLTGSN GEIRKICSFV N
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)