suba logo
AT5G64905.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
vacuole 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24151300 (2013): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : elicitor peptide 3 precursor
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
elicitor peptide 3 precursor (PROPEP3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JU0MeggNOG:ENOG41107BREMBL:AB019236EMBL:AY087551
EMBL:CP002688EnsemblPlants:AT5G64905EnsemblPlants:AT5G64905.1entrez:836614
GeneID:836614Genevisible:Q8LAX3GO:GO:0006952GO:GO:0071456
Gramene:AT5G64905.1HOGENOM:HOG000115496InParanoid:Q8LAX3KEGG:ath:AT5G64905
OMA:MENLRNGPaxDb:Q8LAX3Pfam:Q8LAX3PRIDE:Q8LAX3
PRO:PR:Q8LAX3Proteomes:UP000006548RefSeq:NP_569002.1STRING:3702.AT5G64905.1
TAIR:AT5G64905tair10-symbols:PROPEP3UniGene:At.28932UniProt:Q8LAX3
Coordinates (TAIR10) chr5:+:25939634..25939924
Molecular Weight (calculated) 10399.70 Da
IEP (calculated) 4.19
GRAVY (calculated) -1.00
Length 96 amino acids
Sequence (TAIR10)
(BLAST)
1: MENLRNGEDN GSLIPFTFFD QSSVTIPLLK CSGLESSSSS SSSCDLSSSH SEEDESIDIK EEEEEEEEDG MTIEIKARGK NKTKPTPSSG KGGKHN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)