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AT2G02880.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : mucin-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
mucin-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62270.1); Has 128 Blast hits to 128 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 3; Fungi - 6; Plants - 91; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIE7eggNOG:ENOG410YBDXEMBL:AC004138EMBL:AK118099
EMBL:BT006040EMBL:CP002685EnsemblPlants:AT2G02880EnsemblPlants:AT2G02880.1
entrez:814819GeneID:814819Gramene:AT2G02880.1hmmpanther:PTHR35476
hmmpanther:PTHR35476:SF2HOGENOM:HOG000240088KEGG:ath:AT2G02880OMA:WESAWLP
PhylomeDB:O80607PIR:A84442Proteomes:UP000006548RefSeq:NP_178391.1
TAIR:AT2G02880UniGene:At.21054UniProt:O80607
Coordinates (TAIR10) chr2:+:841303..843151
Molecular Weight (calculated) 35965.90 Da
IEP (calculated) 4.97
GRAVY (calculated) -0.86
Length 314 amino acids
Sequence (TAIR10)
(BLAST)
001: MNSLHRVVGL ISRTTTTSPI SHTRFNLPSI LVNLMSTKSG NDEDKWNDAW ESAWLPDDLT DKIRAPWERD VNFPVKESTA TAIEEIDVEA KAFVEDMNEH
101: WDERRGKSGK VEKREEKKKE IGDGEDESSS SLYSLETMKK DYRLKKQRVH ASLWVKEIEK LEEAKLDDSG SGGGADDIDR LLDSCSEIFD SVDHDFDKLE
201: VSSGSELKNK PDGWESTAKE QDGNLWEMSQ REEDILLQEF DRRTAFCKFQ IASFIKQHIF SRRRPIDGWK YMIEVIGPNA RKGKGSVSRL PALSDVSTQP
301: FKEETSSLTT LKRR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)