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AT2G15690.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
FP Images

Arabidopsis cell culture (mitochondrial marker)

At2g15690-GFP (AA 1-100)mitochondrial marker-RFPoverlay

Images by Sandra Tanz

Arabidopsis cell culture (plastidal marker)

At2g15690-GFP (AA 1-100)plastidal marker-RFPoverlay

Images by Sandra Tanz
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Tetratricopeptide repeat (TPR)-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G32450.1); Has 33034 Blast hits to 15947 proteins in 677 species: Archae - 2; Bacteria - 822; Metazoa - 2903; Fungi - 1398; Plants - 25666; Viruses - 35; Other Eukaryotes - 2208 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410Z7Z7eggNOG:KOG2521eggNOG:KOG4197EMBL:AC006248
EMBL:AY037247EMBL:BT005808EMBL:CP002685EnsemblPlants:AT2G15690
EnsemblPlants:AT2G15690.1entrez:816062GeneID:816062Genevisible:Q9ZQE5
GO:GO:0008270Gramene:AT2G15690.1hmmpanther:PTHR24015hmmpanther:PTHR24015:SF363
HOGENOM:HOG000237569InParanoid:Q9ZQE5InterPro:IPR002885InterPro:IPR032867
KEGG:ath:AT2G15690OMA:GVLGKCGPaxDb:Q9ZQE5Pfam:PF13041
Pfam:PF14432Pfam:Q9ZQE5Pfscan:PS51375PhylomeDB:Q9ZQE5
PIR:B84532PRIDE:Q9ZQE5PRO:PR:Q9ZQE5PROSITE:PS51375
ProteinModelPortal:Q9ZQE5Proteomes:UP000006548RefSeq:NP_565377.1SMR:Q9ZQE5
STRING:3702.AT2G15690.1SwissPalm:Q9ZQE5TAIR:AT2G15690TIGRfam:TIGR00756
TIGRFAMs:TIGR00756UniGene:At.21775UniGene:At.59377UniProt:Q9ZQE5
Coordinates (TAIR10) chr2:-:6831855..6833594
Molecular Weight (calculated) 65617.70 Da
IEP (calculated) 7.51
GRAVY (calculated) -0.70
Length 579 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSLMAIRCA RTQNIVTIGS LLQLRSSFPR LSSQFHFSGT LNSIPIKHLS TSAAANDYHQ NPQSGSPSQH QRPYPPQSFD SQNQTNTNQR VPQSPNQWST
101: QHGGQIPQYG GQNPQHGGQR PPYGGQNPQQ GGQMSQYGGH NPQHGGHRPQ YGGQRPQYGG PGNNYQNQNV QQSNQSQYYT PQQQQQPQPP RSSNQSPNQM
201: NEVAPPPSVE EVMRLCQRRL YKDAIELLDK GAMPDRECFV LLFESCANLK SLEHSKKVHD HFLQSKFRGD PKLNNMVISM FGECSSITDA KRVFDHMVDK
301: DMDSWHLMMC AYSDNGMGDD ALHLFEEMTK HGLKPNEETF LTVFLACATV GGIEEAFLHF DSMKNEHGIS PKTEHYLGVL GVLGKCGHLV EAEQYIRDLP
401: FEPTADFWEA MRNYARLHGD IDLEDYMEEL MVDVDPSKAV INKIPTPPPK SFKETNMVTS KSRILEFRNL TFYKDEAKEM AAKKGVVYVP DTRFVLHDID
501: QEAKEQALLY HSERLAIAYG IICTPPRKTL TIIKNLRVCG DCHNFIKIMS KIIGRVLIVR DNKRFHHFKD GKCSCGDYW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)